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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA986481 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3524253 3524253 PRJNA986481_P_NODE_43443_length_260_cov_0.957346_g42918_i0 PRJNA986481 43443 260 0.957346 2.4890996 Plasmodium brasilianum 5824 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2785761570|ref|XM_067215664.1| 5824 g42918 i0 100 0.111538461538462 29 0 11 0 133 161 281 253 Plasmodium brasilianum uncharacterized protein (MKS88_002638), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
4801312 4801312 PRJNA986481_P_NODE_25904_length_322_cov_3.666667_g25379_i0 PRJNA986481 25904 322 3.666667 11.80666774 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 213 1.31e-50   NTclustered gi|1620144238|ref|XM_028677584.1| 85471 g25379 i0 80.496 20.1739130434783 282 52 87 3 39 319 387 108 Plasmodium relictum histone H3 variant, putative (H3.3), partial mRNA blastn 6496 213 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
4801744 4801744 PRJNA986481_P_NODE_53904_length_248_cov_1.015075_g53379_i0 PRJNA986481 53904 248 1.015075 2.517386 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|916506671|ref|XM_013498301.1| 44415 g53379 i0 100 0.112903225806452 28 0 11 0 76 103 1073 1046 Eimeria mitis uncharacterized protein (EMH_0008300), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
5100463 5100463 PRJNA986481_P_NODE_58004_length_243_cov_1.608247_g57479_i0 PRJNA986481 58004 243 1.608247 3.90804021 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 124 4.579999999999999e-24   NTclustered gi|400365274|gb|JQ684659.1| 5833 g57479 i0 89.796 38.5020576131687 98 8 40 2 103 199 1546 1642 Plasmodium falciparum isolate LF3 28S ribosomal RNA gene, partial sequence blastn 9356 124 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
10200813 10200813 PRJNA986481_P_NODE_60748_length_239_cov_3.347368_g60223_i0 PRJNA986481 60748 239 3.347368 8.00020952 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2785765564|ref|XM_067217861.1| 5824 g60223 i0 100 1.56066945606695 29 0 12 0 1 29 4418 4390 Plasmodium brasilianum serine/threonine protein kinase (MKS88_004665), partial mRNA blastn 373 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
16276850 16276850 PRJNA986481_P_NODE_61513_length_234_cov_2.389189_g60988_i0 PRJNA986481 61513 234 2.389189 5.59070226 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 215 2.53e-51   NTclustered gi|82704988|ref|XM_721689.1| 5861 g60988 i0 83.262 7.63247863247863 233 39 99 0 2 234 547 779 Plasmodium yoelii 26S proteasome subunit 4 protein (PY17X_1209800), partial mRNA blastn 1786 215 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
17551280 17551280 PRJNA986481_P_NODE_2354_length_954_cov_3.013260_g2038_i0 PRJNA986481 2354 954 3.01326 28.7465004 Legerella nova 3081637 SAR_Eukaryotes SAR_Eukaryotes 76.8 5.73e-9   NTclustered gi|2699878143|gb|OR693319.1| 3081637 g2038 i0 91.228 8.06603773584906 57 4 6 1 15 70 19940 19884 Legerella nova apicoplast, complete genome blastn 7695 76.8 1 Eukaryota Sar   Apicomplexa     Legerellidae Legerella Legerella nova
18825203 18825203 PRJNA986481_P_NODE_2755_length_896_cov_2.399055_g2414_i0 PRJNA986481 2755 896 2.399055 21.4955328 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.002   NTclustered gi|124809687|ref|XM_001348618.1| 36329 g2414 i0 77.778 0.392857142857143 108 15 12 6 130 235 2598 2498 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_1450500), partial mRNA blastn 352 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
19123487 19123487 PRJNA986481_P_NODE_5055_length_703_cov_2.822630_g4624_i0 PRJNA986481 5055 703 2.82263 19.8430889 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 84.2 2.49e-11   NTclustered gi|1227113057|gb|KY657285.1| 90962 g4624 i0 77.852 2.75533428165007 149 24 21 9 391 535 203 60 Cryptosporidium sp. isolate 20055-Miar-EU actin gene, partial cds blastn 1937 84.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp.
20099653 20099653 PRJNA986481_P_NODE_11576_length_481_cov_9.379630_g11053_i0 PRJNA986481 11576 481 9.37963 45.1160203 Legerella nova 3081637 SAR_Eukaryotes SAR_Eukaryotes 75 1e-8   NTclustered gi|2699878143|gb|OR693319.1| 3081637 g11053 i0 91.071 15.7214137214137 56 4 11 1 427 481 19940 19885 Legerella nova apicoplast, complete genome blastn 7562 75 1 Eukaryota Sar   Apicomplexa     Legerellidae Legerella Legerella nova
21376095 21376095 PRJNA986481_P_NODE_59737_length_241_cov_2.166667_g59212_i0 PRJNA986481 59737 241 2.166667 5.22166747 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 137 5.82e-28   NTclustered gi|1673116849|ref|XM_029363787.1| 94643 g59212 i0 81.548 3.22406639004149 168 29 69 2 11 177 241 407 Besnoitia besnoiti ribosomal protein RPS13 (BESB_053520), partial mRNA blastn 777 137 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
22650996 22650996 PRJNA986481_P_NODE_56998_length_244_cov_2.476923_g56473_i0 PRJNA986481 56998 244 2.476923 6.04369212 Echinomera hispida 3139261 SAR_Eukaryotes SAR_Eukaryotes 67.6 7.86e-7   NTclustered gi|2716959877|gb|PP657469.1| 3139261 g56473 i0 93.333 15.2909836065574 45 3 18 0 199 243 2827 2871 Echinomera hispida isolate ZBS ribotype 1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3731 67.6 1 Eukaryota Sar   Apicomplexa Conoidasida Arthrogregarida Dactylophoridae Echinomera Echinomera hispida
22949739 22949739 PRJNA986481_P_NODE_19878_length_367_cov_5.830189_g19353_i0 PRJNA986481 19878 367 5.830189 21.39679363 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.035   NTclustered gi|260233916|dbj|AK318321.1| 5811 g19353 i0 100 0.228882833787466 28 0 8 0 287 314 536 509 Toxoplasma gondii cDNA, clone: XTG07019.2, full cDNA, XTG Sugano cDNA library blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
25498627 25498627 PRJNA986481_P_NODE_49000_length_253_cov_1.274510_g48475_i0 PRJNA986481 49000 253 1.27451 3.2245103 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|156098874|ref|XM_001615403.1| 5855 g48475 i0 100 0.33201581027668 28 0 11 0 116 143 1672 1699 Plasmodium vivax hypothetical protein, conserved (PVX_092305), partial mRNA blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;