contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2248745 | 2248745 | PRJNA986481_P_NODE_32962_length_285_cov_1.114407_g32437_i0 | PRJNA986481 | 32962 | 285 | 1.114407 | 3.17605995 | Chlorella variabilis | 554065 | Plants | Plants | 202 | 2.4699999999999997e-47 | NTclustered | gi|552839119|ref|XM_005849662.1| | 554065 | g32437 | i0 | 83.41 | 19.3929824561404 | 217 | 36 | 76 | 0 | 1 | 217 | 227 | 443 | Chlorella variabilis hypothetical protein (CHLNCDRAFT_21383) mRNA, complete cds | blastn | 5527 | 202 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 2547685 | 2547685 | PRJNA986481_P_NODE_14362_length_433_cov_1.236979_g13837_i0 | PRJNA986481 | 14362 | 433 | 1.236979 | 5.35611907 | Eukaryota | 2759 | Plants | Plants | 315 | 4.83e-81 | NTclustered | gi|926791444|ref|XM_014048742.1| | 145388 | g13837 | i0 | 80.182 | 32.9815242494226 | 439 | 72 | 100 | 11 | 1 | 433 | 2841 | 2412 | Monoraphidium neglectum adenosylhomocysteinase mRNA | blastn | 14281 | 318 | 0.990566037735849 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 3523761 | 3523761 | PRJNA986481_P_NODE_10623_length_502_cov_10.896247_g10102_i0 | PRJNA986481 | 10623 | 502 | 10.896247 | 54.69915994 | Monoraphidium neglectum | 145388 | Plants | Plants | 272 | 3.46e-68 | NTclustered | gi|926795717|ref|XM_014050538.1| | 145388 | g10102 | i0 | 86.585 | 43.4083665338645 | 246 | 33 | 49 | 0 | 32 | 277 | 115 | 360 | Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA | blastn | 21791 | 272 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 4801641 | 4801641 | PRJNA986481_P_NODE_47144_length_255_cov_1.941748_g46619_i0 | PRJNA986481 | 47144 | 255 | 1.941748 | 4.9514574 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 135 | 2.24e-27 | NTclustered | gi|2082239523|ref|XM_001699755.2| | 3055 | g46619 | i0 | 88.496 | 16.6941176470588 | 113 | 11 | 44 | 2 | 137 | 248 | 756 | 645 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g101350v5), mRNA | blastn | 4257 | 135 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 4801718 | 4801718 | PRJNA986481_P_NODE_5224_length_694_cov_1.719380_g4789_i0 | PRJNA986481 | 5224 | 694 | 1.71938 | 11.9324972 | Chlorotetraedron incus | 162317 | Plants | Plants | 141 | 1.44e-28 | NTclustered | gi|674840704|ref|NC_024757.1| | 162317 | g4789 | i0 | 80.412 | 3.81988472622478 | 194 | 30 | 28 | 7 | 371 | 561 | 18927 | 19115 | Chlorotetraedron incus strain SAG 43.81 mitochondrion, complete genome | blastn | 2651 | 141 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Neochloridaceae | Chlorotetraedron | Chlorotetraedron incus | |
| 6076793 | 6076793 | PRJNA986481_P_NODE_3465_length_816_cov_3.767927_g3092_i0 | PRJNA986481 | 3465 | 816 | 3.767927 | 30.74628432 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 385 | 7.12e-102 | NTclustered | gi|2082239556|ref|XM_001699745.2| | 3055 | g3092 | i0 | 84.343 | 61.7904411764706 | 396 | 58 | 48 | 4 | 9 | 402 | 136 | 529 | Chlamydomonas reinhardtii ribosomal protein S3 (CHLRE_02g102250v5), mRNA | blastn | 50421 | 385 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 6076877 | 6076877 | PRJNA986481_P_NODE_40265_length_263_cov_1.785047_g39740_i0 | PRJNA986481 | 40265 | 263 | 1.785047 | 4.69467361 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 106 | 1.82e-18 | NTclustered | gi|2082260798|ref|XM_001697008.2| | 3055 | g39740 | i0 | 92 | 2.11026615969582 | 75 | 6 | 29 | 0 | 63 | 137 | 1031 | 957 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g520500v5), mRNA | blastn | 555 | 106 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 8626484 | 8626484 | PRJNA986481_P_NODE_30587_length_295_cov_5.390244_g30062_i0 | PRJNA986481 | 30587 | 295 | 5.390244 | 15.9012198 | Ulothrix zonata | 43941 | Plants | Plants | 508 | 1.35e-139 | NTclustered | gi|530445654|emb|HE860533.1| | 43941 | g30062 | i0 | 100 | 93.2779661016949 | 275 | 0 | 93 | 0 | 1 | 275 | 313 | 39 | Ulothrix zonata partial 28S rRNA gene, isolate Q19 | blastn | 27517 | 508 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Ulotrichaceae | Ulothrix | Ulothrix zonata | |
| 10200634 | 10200634 | PRJNA986481_P_NODE_19328_length_372_cov_2.863777_g18803_i0 | PRJNA986481 | 19328 | 372 | 2.863777 | 10.65325044 | Chlorophyta | 3041 | Plants | Plants | 159 | 2.0299999999999993e-34 | NTclustered | gi|2909905167|gb|PV102504.1| | 51693 | g18803 | i0 | 92.793 | 29.8387096774194 | 111 | 7 | 30 | 1 | 262 | 372 | 1480 | 1589 | Lobochlamys culleus strain Ter-4-1 small subunit ribosomal RNA gene, partial sequence | blastn | 11100 | 159 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Lobochlamys | Lobochlamys culleus | |
| 12452947 | 12452947 | PRJNA986481_P_NODE_4530_length_736_cov_10.401747_g4111_i0 | PRJNA986481 | 4530 | 736 | 10.401747 | 76.55685792 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 346 | 3.02e-90 | NTclustered | gi|2082248650|ref|XM_043063418.1| | 3055 | g4111 | i0 | 80.294 | 63.7540760869565 | 477 | 79 | 64 | 14 | 242 | 710 | 856 | 387 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA | blastn | 46923 | 346 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 12452993 | 12452993 | PRJNA986481_P_NODE_48010_length_254_cov_1.707317_g47485_i0 | PRJNA986481 | 48010 | 254 | 1.707317 | 4.33658518 | Polytomella sp. Pringsheim 198.80 | 37502 | Plants | Plants | 182 | 2.82e-41 | NTclustered | gi|635557420|emb|FN984965.1| | 37502 | g47485 | i0 | 81.034 | 24.5629921259843 | 232 | 40 | 91 | 4 | 25 | 254 | 1454 | 1225 | Polytomella sp. Pringsheim 198.80 mRNA for S-Adenosyl homocysteine hydrolase (sah1 gene) | blastn | 6239 | 182 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Polytomella | Polytomella sp. Pringsheim 198.80 | |
| 13727607 | 13727607 | PRJNA986481_P_NODE_6631_length_626_cov_5.176776_g6153_i0 | PRJNA986481 | 6631 | 626 | 5.176776 | 32.40661776 | Chlamydomonas incerta | 51695 | Plants | Plants | 198 | 7.539999999999999e-46 | NTclustered | gi|74272610|gb|DQ122870.1| | 51695 | g6153 | i0 | 81.061 | 21.7923322683706 | 264 | 36 | 41 | 12 | 368 | 624 | 395 | 139 | Chlamydomonas incerta 60S ribosomal protein L11 mRNA, complete cds | blastn | 13642 | 198 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas incerta | |
| 15001108 | 15001108 | PRJNA986481_P_NODE_1132_length_1242_cov_29.820620_g924_i0 | PRJNA986481 | 1132 | 1242 | 29.82062 | 370.3721004 | Trentepohlia sp. BN17 | 3063876 | Plants | Plants | 76.8 | 7.53e-9 | NTclustered | gi|2192923729|ref|NC_060532.1| | 3063876 | g924 | i0 | 92.453 | 0.28743961352657 | 53 | 4 | 4 | 0 | 657 | 709 | 223433 | 223485 | Trentepohlia sp. BN17 chloroplast, complete genome | blastn | 357 | 76.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Trentepohliales | Trentepohliaceae | Trentepohlia | Trentepohlia sp. BN17 | |
| 15001562 | 15001562 | PRJNA986481_P_NODE_3992_length_773_cov_2.027624_g3596_i0 | PRJNA986481 | 3992 | 773 | 2.027624 | 15.67353352 | Tetraselmis marina | 41888 | Plants | Plants | 139 | 5.78e-28 | NTclustered | gi|2301280732|ref|NC_066039.1| | 41888 | g3596 | i0 | 81.034 | 15.5278137128072 | 174 | 33 | 23 | 0 | 500 | 673 | 5516 | 5689 | Tetraselmis marina mitochondrion, complete genome | blastn | 12003 | 139 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorodendrophyceae | Chlorodendrales | Chlorodendraceae | Tetraselmis | Tetraselmis marina | |
| 16276078 | 16276078 | PRJNA986481_P_NODE_11753_length_478_cov_1.883450_g11230_i0 | PRJNA986481 | 11753 | 478 | 1.88345 | 9.002891 | Monoraphidium neglectum | 145388 | Plants | Plants | 231 | 5.57e-56 | NTclustered | gi|926795717|ref|XM_014050538.1| | 145388 | g11230 | i0 | 80.192 | 33.092050209205 | 313 | 58 | 65 | 4 | 97 | 407 | 365 | 55 | Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA | blastn | 15818 | 231 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 18825408 | 18825408 | PRJNA986481_P_NODE_39475_length_264_cov_1.934884_g38950_i0 | PRJNA986481 | 39475 | 264 | 1.934884 | 5.10809376 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 126 | 1.3999999999999999e-24 | NTclustered | gi|2082237163|ref|XM_043058766.1| | 3055 | g38950 | i0 | 78.049 | 1.5530303030303 | 205 | 41 | 77 | 4 | 62 | 264 | 854 | 652 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g039250v5), mRNA | blastn | 410 | 126 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 21375373 | 21375373 | PRJNA986481_P_NODE_13877_length_440_cov_1.823529_g13353_i0 | PRJNA986481 | 13877 | 440 | 1.823529 | 8.0235276 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 562 | 1.59e-155 | NTclustered | gi|167449|gb|M11448.1|CRETBA2A | 3055 | g13353 | i0 | 89.773 | 99.8977272727273 | 440 | 43 | 99 | 2 | 1 | 439 | 1378 | 940 | Chlamydomonas reinhardtii alpha-2 tubulin gene, complete cds | blastn | 43955 | 562 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 21376006 | 21376006 | PRJNA986481_P_NODE_54277_length_247_cov_2.191919_g53752_i0 | PRJNA986481 | 54277 | 247 | 2.191919 | 5.41403993 | Spongiochrysis hawaiiensis | 333302 | Plants | Plants | 135 | 2.15e-27 | NTclustered | gi|527482308|emb|HE664128.1| | 333302 | g53752 | i0 | 89.72 | 41.502024291498 | 107 | 9 | 43 | 2 | 1 | 107 | 249 | 353 | Spongiochrysis hawaiiensis partial 28S rRNA gene, specimen voucher WELT:A031452, strain G89 | blastn | 10251 | 135 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Cladophorales | Cladophoraceae | Spongiochrysis | Spongiochrysis hawaiiensis | |
| 21674364 | 21674364 | PRJNA986481_P_NODE_12797_length_458_cov_2.709046_g12273_i0 | PRJNA986481 | 12797 | 458 | 2.709046 | 12.40743068 | Eukaryota | 2759 | Plants | Plants | 207 | 8.96e-49 | NTclustered | gi|552840730|ref|XM_005850063.1| | 554065 | g12273 | i0 | 79.139 | 16.9890829694323 | 302 | 61 | 66 | 2 | 155 | 455 | 468 | 168 | Chlorella variabilis 40S ribosomal protein S18 (CHLNCDRAFT_34417) mRNA, complete cds | blastn | 7781 | 209 | 0.990430622009569 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 22650527 | 22650527 | PRJNA986481_P_NODE_28538_length_307_cov_1.565891_g28013_i0 | PRJNA986481 | 28538 | 307 | 1.565891 | 4.80728537 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 187 | 7.529999999999999e-43 | NTclustered | gi|545364605|ref|XM_005647292.1| | 574566 | g28013 | i0 | 78.596 | 71.7850162866449 | 285 | 59 | 93 | 2 | 1 | 284 | 790 | 1073 | Coccomyxa subellipsoidea C-169 heat shock 70 protein mRNA | blastn | 22038 | 187 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;