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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA986481" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA986481 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4801782 4801782 PRJNA986481_P_NODE_55924_length_246_cov_0.984772_g55399_i0 PRJNA986481 55924 246 0.984772 2.42253912 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.022   NTclustered gi|923118750|ref|XM_013897396.1| 461836 g55399 i0 100 0.227642276422764 28 0 11 0 186 213 843 870 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11197), partial mRNA blastn 56 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6076451 6076451 PRJNA986481_P_NODE_13925_length_439_cov_2.620513_g13401_i0 PRJNA986481 13925 439 2.620513 11.50405207 Thecamonas trahens 529818 Root_unresolved Root_unresolved 219 3.95e-52   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g13401 i0 82.49 40.5170842824601 257 37 58 6 5 257 529 277 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 17787 219 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8626275 8626275 PRJNA986481_P_NODE_1827_length_1053_cov_8.651394_g1553_i0 PRJNA986481 1827 1053 8.651394 91.09917882 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 1.05e-16   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g1553 i0 87.64 12.2583095916429 89 9 17 2 355 442 6020 6107 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12908 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
17551292 17551292 PRJNA986481_P_NODE_2434_length_940_cov_4.794613_g2114_i0 PRJNA986481 2434 940 4.794613 45.0693622 Thecamonas trahens 529818 Root_unresolved Root_unresolved 355 6.47e-93   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g2114 i0 76.309 18.336170212766 726 136 76 26 181 891 997 293 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 17236 355 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;