RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA983848" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA983848 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21673892 21673892 PRJNA983848_P_NODE_167657_length_200_cov_5.464567_g161774_i0 PRJNA983848 167657 200 5.464567 10.929134 Desulfarculus 453229 Bacteria Bacteria 326 9.27e-85   NTclustered gi|470486527|ref|NR_076763.1| 453230 g161774 i0 96 219.975 200 8 100 0 1 200 2345 2544 Desulfarculus baarsii strain 2st14 23S ribosomal RNA gene, complete sequence blastn 43995 326 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfarculia Desulfarculales Desulfarculaceae Desulfarculus Desulfarculus baarsii
25196758 25196758 PRJNA983848_P_NODE_75240_length_360_cov_1.885017_g69357_i0 PRJNA983848 75240 360 1.885017 6.7860612 Candidatus Desulfofervidus auxilii 1621989 Bacteria Bacteria 165 4.2e-36   NTclustered gi|1001906061|gb|CP013015.1| 1621989 g69357 i0 78.652 146.625 267 44 71 10 104 360 268496 268233 Candidatus Desulfofervidus auxilii strain HS1 genome blastn 52785 165 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Desulfofervidia Candidatus Desulfofervidales Candidatus Desulfofervidaceae Candidatus Desulfofervidus Candidatus Desulfofervidus auxilii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;