RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA983848" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA983848 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2246215 2246215 PRJNA983848_P_NODE_86282_length_330_cov_4.408560_g80399_i0 PRJNA983848 86282 330 4.40856 14.548248 Sycon ciliatum 27933 Porifera other_Eukaryota 78.7 5.13e-10   NTclustered gi|2732913824|ref|XM_065323734.1| 27933 g80399 i0 97.778 0.239393939393939 45 1 14 0 273 317 1572 1616 PREDICTED: Sycon ciliatum isobutyryl-CoA dehydrogenase, mitochondrial-like (LOC135810254), mRNA blastn 79 78.7 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
11173696 11173696 PRJNA983848_P_NODE_68209_length_385_cov_1.660256_g62326_i0 PRJNA983848 68209 385 1.660256 6.3919856 Sycon ciliatum 27933 Porifera other_Eukaryota 52.8 0.037   NTclustered gi|2732934645|ref|XM_065334403.1| 27933 g62326 i0 100 0.0727272727272727 28 0 7 0 64 91 3136 3163 PREDICTED: Sycon ciliatum uncharacterized LOC135821340 (LOC135821340), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
12445453 12445453 PRJNA983848_P_NODE_104990_length_294_cov_2.452489_g99107_i0 PRJNA983848 104990 294 2.452489 7.21031766 Dysidea avara 196820 Porifera other_Eukaryota 54.7 0.008   NTclustered gi|2749555105|ref|XM_066044695.1| 196820 g99107 i0 96.875 0.108843537414966 32 1 11 0 48 79 1149 1118 PREDICTED: Dysidea avara deoxyribonuclease-1-like (LOC136252285), transcript variant X2, mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;