RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA983848" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA983848 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
969862 969862 PRJNA983848_P_NODE_56601_length_442_cov_2.699187_g50721_i0 PRJNA983848 56601 442 2.699187 11.93040654 Diadema antillarum 105358 Echinodermata other_Eukaryota 512 1.6299999999999998e-140   NTclustered gi|2919521130|ref|XM_071653395.1| 105358 g50721 i0 87.699 1.05656108597285 439 54 99 0 3 441 728 1166 PREDICTED: Diadema antillarum uncharacterized protein (LOC139742884), mRNA blastn 467 512 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
970042 970042 PRJNA983848_P_NODE_61321_length_415_cov_1.991228_g55439_i0 PRJNA983848 61321 415 1.991228 8.2635962 Diadema antillarum 105358 Echinodermata other_Eukaryota 484 3.32e-132   NTclustered gi|2919511784|ref|XM_071651784.1| 105358 g55439 i0 88.395 2.06506024096386 405 44 97 3 1 404 1477 1075 PREDICTED: Diadema antillarum uncharacterized protein (LOC139741193), mRNA blastn 857 484 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
2245164 2245164 PRJNA983848_P_NODE_58342_length_431_cov_3.000000_g52461_i0 PRJNA983848 58342 431 3 12.93 Anneissia japonica 1529436 Echinodermata other_Eukaryota 80.5 1.91e-10   NTclustered gi|1826652272|ref|XM_033258159.1| 1529436 g52461 i0 76.974 0.352668213457077 152 27 34 8 105 252 190 337 PREDICTED: Anneissia japonica PHD finger protein ALFIN-LIKE 3-like (LOC117114492), mRNA blastn 152 80.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
14998543 14998543 PRJNA983848_P_NODE_75872_length_358_cov_1.922807_g69989_i0 PRJNA983848 75872 358 1.922807 6.88364906 Diadema antillarum 105358 Echinodermata other_Eukaryota 289 2.37e-73   NTclustered gi|2919531170|ref|XM_071655205.1| 105358 g69989 i0 87.109 2.5586592178771 256 32 71 1 1 255 202 457 PREDICTED: Diadema antillarum craniofacial development protein 2-like (LOC139744789), mRNA blastn 916 289 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
21368455 21368455 PRJNA983848_P_NODE_104537_length_295_cov_1.756757_g98654_i0 PRJNA983848 104537 295 1.756757 5.18243315 Diadema antillarum 105358 Echinodermata other_Eukaryota 100 9.64e-17   NTclustered gi|2919390218|ref|XM_071629782.1| 105358 g98654 i0 87.5 3.3728813559322 88 9 30 1 184 271 6924 6839 PREDICTED: Diadema antillarum uncharacterized protein (LOC139718298), mRNA blastn 995 100 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;