RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA982720" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA982720 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3514856 3514856 PRJNA982720_S_NODE_3263_length_338_cov_4.030189_g3235_i0 PRJNA982720 3263 338 4.030189 13.62203882 Cylindricascospora bacillispora 51660 Fungi Fungi 54.7 0.009   NTclustered gi|228015422|ref|NC_012621.1| 51660 g3235 i0 100 0.0857988165680473 29 0 9 0 273 301 27381 27409 Nakaseomyces bacillisporus mitochondrion, complete genome blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Cylindricascospora Cylindricascospora bacillispora
16267161 16267161 PRJNA982720_S_NODE_1733_length_387_cov_3.175159_g1705_i0 PRJNA982720 1733 387 3.175159 12.28786533 Sarocladium implicatum 1610689 Fungi Fungi 307 7.140000000000001e-79   NTclustered gi|761546238|ref|NC_026534.1| 1610689 g1705 i0 81.818 2.45478036175711 396 45 98 17 10 387 2355 1969 Acremonium implicatum mitochondrion, complete genome blastn 950 307 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium implicatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;