RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA982106" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA982106 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9891727 9891727 PRJNA982106_P_NODE_11628_length_310_cov_2.147679_g11388_i0 PRJNA982106 11628 310 2.147679 6.6578049 Kickxella alabastrina 61397 Fungi Fungi 228 4.4799999999999984e-55   NTclustered gi|2323998193|ref|XM_051533362.1| 61397 g11388 i0 80.903 60 288 55 93 0 23 310 38 325 Kickxella alabastrina 60S ribosomal protein L21-A (BX661DRAFT_167737), partial mRNA blastn 18600 228 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;