RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA982106" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA982106 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11167335 11167335 PRJNA982106_P_NODE_29929_length_243_cov_0.905882_g29689_i0 PRJNA982106 29929 243 0.905882 2.20129326 Methanimicrococcus hongohii 3028295 Archaea Archaea 119 2.13e-22   NTclustered gi|2591774574|gb|CP131059.1| 3028295 g29689 i0 82.143 57.522633744856 140 24 57 1 12 150 946106 946245 Methanimicrococcus hongohii strain Hf6 chromosome, complete genome blastn 13978 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanimicrococcus Methanimicrococcus hongohii
12442824 12442824 PRJNA982106_P_NODE_15410_length_282_cov_1.148325_g15170_i0 PRJNA982106 15410 282 1.148325 3.2382765 Halostagnicola larsenii 353800 Archaea Archaea 327 3.86e-85   NTclustered gi|573479867|gb|CP007055.1| 797299 g15170 i0 87.589 25.2695035460993 282 35 100 0 1 282 1061690 1061971 Halostagnicola larsenii XH-48, complete genome blastn 7126 327 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halostagnicola Halostagnicola larsenii
17541624 17541624 PRJNA982106_P_NODE_16434_length_275_cov_1.311881_g16194_i0 PRJNA982106 16434 275 1.311881 3.60767275 Natronococcus occultus 29288 Archaea Archaea 252 2.32e-62   NTclustered gi|433671692|gb|CP003929.1| 694430 g16194 i0 85.141 2.04727272727273 249 33 90 4 14 260 3872567 3872813 Natronococcus occultus SP4, complete genome blastn 563 252 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus occultus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;