RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA981359" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA981359 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9890256 9890256 PRJNA981359_S_NODE_27788_length_334_cov_1.793103_g27688_i0 PRJNA981359 27788 334 1.793103 5.98896402 Acropora muricata 159855 Cnidaria other_Eukaryota 440 5.749999999999997e-119   NTclustered gi|2784680719|ref|XM_067170670.1| 159855 g27688 i0 91.018 22.0209580838323 334 18 100 7 1 334 71 392 PREDICTED: Acropora muricata uncharacterized protein (LOC136898106), mRNA blastn 7355 440 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
9891530 9891530 PRJNA981359_S_NODE_73008_length_242_cov_1.656805_g72908_i0 PRJNA981359 73008 242 1.656805 4.0094681 Anemonia sulcata 6108 Cnidaria other_Eukaryota 71.3 6.02e-8   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g72908 i0 95.455 2.04545454545455 44 2 18 0 6 49 19554887 19554930 Anemonia sulcata genome assembly, chromosome: 1 blastn 495 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
14989640 14989640 PRJNA981359_S_NODE_13792_length_391_cov_2.072327_g13692_i0 PRJNA981359 13792 391 2.072327 8.10279857 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.037   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g13692 i0 100 0.0716112531969309 28 0 7 0 119 146 15057863 15057890 Anemonia sulcata genome assembly, chromosome: 2 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;