contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA980839" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2232372 | 2232372 | PRJNA980839_P_NODE_130202_length_310_cov_1.130802_g126418_i0 | PRJNA980839 | 130202 | 310 | 1.130802 | 3.5054862 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 291 | 5.64e-74 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g126418 | i0 | 92.965 | 81.9709677419355 | 199 | 14 | 64 | 0 | 1 | 199 | 1316193 | 1316391 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 25411 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2232381 | 2232381 | PRJNA980839_P_NODE_130642_length_309_cov_1.741525_g126858_i0 | PRJNA980839 | 130642 | 309 | 1.741525 | 5.38131225 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 296 | 1.21e-75 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g126858 | i0 | 84.039 | 13.2330097087379 | 307 | 49 | 99 | 0 | 1 | 307 | 3621055 | 3621361 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 4089 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6061937 | 6061937 | PRJNA980839_P_NODE_211285_length_248_cov_0.880000_g207501_i0 | PRJNA980839 | 211285 | 248 | 0.88 | 2.1824 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 276 | 1.22e-69 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g207501 | i0 | 86.992 | 1.10483870967742 | 246 | 30 | 99 | 2 | 1 | 245 | 825058 | 825302 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 274 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 7336336 | 7336336 | PRJNA980839_P_NODE_206506_length_249_cov_0.875000_g202722_i0 | PRJNA980839 | 206506 | 249 | 0.875 | 2.17875 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 340 | 4.29e-89 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g202722 | i0 | 91.532 | 287.060240963855 | 248 | 20 | 99 | 1 | 1 | 248 | 5625211 | 5625457 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 71478 | 340 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 12436607 | 12436607 | PRJNA980839_P_NODE_150230_length_287_cov_1.205607_g146446_i0 | PRJNA980839 | 150230 | 287 | 1.205607 | 3.46009209 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 161 | 4.23e-35 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g146446 | i0 | 77.551 | 1.02439024390244 | 294 | 49 | 99 | 15 | 3 | 287 | 81926 | 82211 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 294 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 12437359 | 12437359 | PRJNA980839_P_NODE_188190_length_257_cov_1.326087_g184406_i0 | PRJNA980839 | 188190 | 257 | 1.326087 | 3.40804359 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 272 | 1.65e-68 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g184406 | i0 | 86.275 | 24.9377431906615 | 255 | 30 | 98 | 5 | 7 | 257 | 4348224 | 4348477 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 6409 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12437669 | 12437669 | PRJNA980839_P_NODE_205110_length_249_cov_1.034091_g201326_i0 | PRJNA980839 | 205110 | 249 | 1.034091 | 2.57488659 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 248 | 2.68e-61 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g201326 | i0 | 85.837 | 72.710843373494 | 233 | 33 | 94 | 0 | 7 | 239 | 2749842 | 2750074 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 18105 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12438581 | 12438581 | PRJNA980839_P_NODE_32230_length_884_cov_2.512947_g28900_i0 | PRJNA980839 | 32230 | 884 | 2.512947 | 22.21445148 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 361 | 1.3e-94 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g28900 | i0 | 85.237 | 2.92194570135747 | 359 | 44 | 41 | 4 | 521 | 879 | 3215874 | 3216223 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 2583 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 13713204 | 13713204 | PRJNA980839_P_NODE_39911_length_734_cov_1.679274_g36316_i0 | PRJNA980839 | 39911 | 734 | 1.679274 | 12.32587116 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 464 | 7.969999999999999e-126 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g36316 | i0 | 78.562 | 10.224795640327 | 723 | 142 | 97 | 11 | 20 | 734 | 2332685 | 2333402 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 7505 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 16261608 | 16261608 | PRJNA980839_P_NODE_215253_length_247_cov_0.885057_g211469_i0 | PRJNA980839 | 215253 | 247 | 0.885057 | 2.18609079 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 276 | 1.22e-69 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g211469 | i0 | 91.133 | 29.8380566801619 | 203 | 18 | 82 | 0 | 30 | 232 | 1459 | 1257 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 7370 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 17537098 | 17537098 | PRJNA980839_P_NODE_240214_length_240_cov_2.215569_g236430_i0 | PRJNA980839 | 240214 | 240 | 2.215569 | 5.3173656 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 154 | 5.75e-33 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g236430 | i0 | 84.177 | 1.70833333333333 | 158 | 25 | 66 | 0 | 1 | 158 | 4559529 | 4559686 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 410 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 22634961 | 22634961 | PRJNA980839_P_NODE_172698_length_268_cov_1.620513_g168914_i0 | PRJNA980839 | 172698 | 268 | 1.620513 | 4.34297484 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 364 | 2.769999999999999e-96 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g168914 | i0 | 91.386 | 254.462686567164 | 267 | 21 | 99 | 2 | 4 | 268 | 3832556 | 3832822 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 68196 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;