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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA980839" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA980839 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3508989 3508989 PRJNA980839_P_NODE_201163_length_250_cov_1.231638_g197379_i0 PRJNA980839 201163 250 1.231638 3.079095 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 217 7.59e-52   NTclustered gi|292559443|ref|NC_013986.1| 5778 g197379 i0 85.446 0.852 213 26 85 1 2 214 9721 9928 Hartmannella vermiformis mitochondrion, complete genome blastn 213 217 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
5098495 5098495 PRJNA980839_P_NODE_200364_length_250_cov_1.740113_g196580_i0 PRJNA980839 200364 250 1.740113 4.3502825 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 451 1.91e-122   NTclustered gi|909719645|gb|KT185625.1| 5778 g196580 i0 99.2 7.012 250 2 100 0 1 250 3601 3850 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1753 451 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6060127 6060127 PRJNA980839_P_NODE_121185_length_323_cov_0.984000_g117401_i0 PRJNA980839 121185 323 0.984 3.17832 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 547 3.1699999999999985e-151   NTclustered gi|909719645|gb|KT185625.1| 5778 g117401 i0 97.214 36.0061919504644 323 9 100 0 1 323 7051 6729 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 11630 547 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6060566 6060566 PRJNA980839_P_NODE_141505_length_295_cov_3.207207_g137721_i0 PRJNA980839 141505 295 3.207207 9.46126065 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 518 2.25e-142   NTclustered gi|292559443|ref|NC_013986.1| 5778 g137721 i0 98.311 103.698305084746 296 4 100 1 1 295 28138 27843 Hartmannella vermiformis mitochondrion, complete genome blastn 30591 518 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6060911 6060911 PRJNA980839_P_NODE_159705_length_279_cov_1.024272_g155921_i0 PRJNA980839 159705 279 1.024272 2.85771888 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 161 4.0899999999999995e-35   NTclustered gi|300078497|gb|GU001159.1| 200886 g155921 i0 78.74 3.63082437275986 254 45 89 6 32 279 1837 2087 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1013 161 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
6063873 6063873 PRJNA980839_P_NODE_91525_length_384_cov_1.109325_g87741_i0 PRJNA980839 91525 384 1.109325 4.259808 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 374 6.889999999999998e-99   NTclustered gi|909719647|gb|KT185627.1| 5778 g87741 i0 84.496 17.8880208333333 387 51 100 7 1 384 26270 25890 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 6869 374 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7334391 7334391 PRJNA980839_P_NODE_110706_length_340_cov_1.947566_g106922_i0 PRJNA980839 110706 340 1.947566 6.6217244 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 265 3.79e-66   NTclustered gi|292559443|ref|NC_013986.1| 5778 g106922 i0 81.609 28.0882352941176 348 39 96 21 2 328 3879 4222 Hartmannella vermiformis mitochondrion, complete genome blastn 9550 265 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7335239 7335239 PRJNA980839_P_NODE_150806_length_286_cov_1.906103_g147022_i0 PRJNA980839 150806 286 1.906103 5.45145458 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 291 5.15e-74   NTclustered gi|292559443|ref|NC_013986.1| 5778 g147022 i0 85.017 1.22027972027972 287 41 100 2 1 286 17973 17688 Hartmannella vermiformis mitochondrion, complete genome blastn 349 291 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7337684 7337684 PRJNA980839_P_NODE_55666_length_555_cov_2.006224_g51908_i0 PRJNA980839 55666 555 2.006224 11.1345432 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 830 0   NTclustered gi|909719647|gb|KT185627.1| 5778 g51908 i0 93.716 86.954954954955 557 30 100 4 1 555 26821 26268 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 48260 830 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12439204 12439204 PRJNA980839_P_NODE_67310_length_479_cov_1.605911_g63528_i0 PRJNA980839 67310 479 1.605911 7.69231369 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 584 3.7199999999999985e-162   NTclustered gi|909719647|gb|KT185627.1| 5778 g63528 i0 88.773 2.0125260960334 481 49 100 5 1 479 28335 28812 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 964 584 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12439557 12439557 PRJNA980839_P_NODE_84930_length_404_cov_1.350453_g81146_i0 PRJNA980839 84930 404 1.350453 5.45583012 Centropyxis laevigata 318528 Tubulinea other_Eukaryota 736 0   NTclustered gi|61655689|gb|AY848965.1| 318528 g81146 i0 99.505 43.9628712871287 404 2 100 0 1 404 439 36 Centropyxis laevigata small subunit ribosomal RNA gene, partial sequence blastn 17761 736 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Centropyxidae Centropyxis Centropyxis laevigata
13713818 13713818 PRJNA980839_P_NODE_72771_length_452_cov_1.593668_g68987_i0 PRJNA980839 72771 452 1.593668 7.20337936 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 270 1.11e-67   NTclustered gi|292559443|ref|NC_013986.1| 5778 g68987 i0 77.655 1 452 95 99 6 2 450 41134 40686 Hartmannella vermiformis mitochondrion, complete genome blastn 452 270 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14984580 14984580 PRJNA980839_P_NODE_114912_length_333_cov_1.292308_g111128_i0 PRJNA980839 114912 333 1.292308 4.30338564 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 217 1.05e-51   NTclustered gi|292559443|ref|NC_013986.1| 5778 g111128 i0 80.399 1.78978978978979 301 45 89 8 1 297 2098 2388 Hartmannella vermiformis mitochondrion, complete genome blastn 596 217 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14986462 14986462 PRJNA980839_P_NODE_207572_length_248_cov_2.885714_g203788_i0 PRJNA980839 207572 248 2.885714 7.15657072 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 431 2.47e-116   NTclustered gi|909719647|gb|KT185627.1| 5778 g203788 i0 97.984 97.625 248 5 100 0 1 248 20625 20378 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 24211 431 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14987512 14987512 PRJNA980839_P_NODE_43472_length_683_cov_1.732787_g39797_i0 PRJNA980839 43472 683 1.732787 11.83493521 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 483 2.04e-131   NTclustered gi|909719647|gb|KT185627.1| 5778 g39797 i0 80.308 2.43484626647145 650 119 95 8 1 647 22143 22786 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 1663 483 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
15297691 15297691 PRJNA980839_P_NODE_128652_length_312_cov_1.117155_g124868_i0 PRJNA980839 128652 312 1.117155 3.4855236 Vermamoeba 1260114 Tubulinea other_Eukaryota 549 8.489999999999997e-152   NTclustered gi|909719645|gb|KT185625.1| 5778 g124868 i0 98.397 83.1634615384615 312 5 100 0 1 312 4917 5228 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 25947 549 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17535978 17535978 PRJNA980839_P_NODE_182894_length_261_cov_0.984043_g179110_i0 PRJNA980839 182894 261 0.984043 2.56835223 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 254 6.08e-63   NTclustered gi|909719647|gb|KT185627.1| 5778 g179110 i0 92.265 1.39080459770115 181 10 68 2 83 259 25694 25874 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 363 254 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
18812355 18812355 PRJNA980839_P_NODE_92875_length_380_cov_1.671010_g89091_i0 PRJNA980839 92875 380 1.67101 6.349838 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 196 1.58e-45   NTclustered gi|909719647|gb|KT185627.1| 5778 g89091 i0 88.82 1.28684210526316 161 16 42 2 217 377 41605 41763 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 489 196 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
21362672 21362672 PRJNA980839_P_NODE_92797_length_380_cov_2.120521_g89013_i0 PRJNA980839 92797 380 2.120521 8.0579798 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 521 2.3e-143   NTclustered gi|909719645|gb|KT185625.1| 5778 g89013 i0 95.679 0.852631578947368 324 14 85 0 1 324 327 4 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 324 521 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23912690 23912690 PRJNA980839_P_NODE_66599_length_483_cov_1.595122_g62817_i0 PRJNA980839 66599 483 1.595122 7.70443926 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 839 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g62817 i0 98.137 54.9130434782609 483 5 100 3 1 483 2682 3160 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 26523 839 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
25185526 25185526 PRJNA980839_P_NODE_247160_length_216_cov_11.258741_g243376_i0 PRJNA980839 247160 216 11.258741 24.31888056 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 233 6.34e-57   NTclustered gi|909719647|gb|KT185627.1| 5778 g243376 i0 86.364 6.02777777777778 220 23 100 6 1 216 51232 51448 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 1302 233 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;