RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA980839" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980839 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
960718 960718 PRJNA980839_P_NODE_99761_length_363_cov_1.324138_g95977_i0 PRJNA980839 99761 363 1.324138 4.80662094 Mercenaria mercenaria 6596 Mollusca Mollusca 93.5 2.03e-14   NTclustered gi|2442016429|ref|XR_008367939.1| 6596 g95977 i0 98.113 84.129476584022 53 1 15 0 311 363 1096 1148 PREDICTED: Mercenaria mercenaria uncharacterized LOC123541009 (LOC123541009), ncRNA blastn 30539 93.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
6061905 6061905 PRJNA980839_P_NODE_209465_length_248_cov_0.880000_g205681_i0 PRJNA980839 209465 248 0.88 2.1824 Mytilus californianus 6549 Mollusca Mollusca 58.4 4.82e-4   NTclustered gi|2334651268|ref|XM_052230318.1| 6549 g205681 i0 92.5 0.161290322580645 40 3 16 0 135 174 189 150 PREDICTED: Mytilus californianus uncharacterized LOC127723618 (LOC127723618), mRNA blastn 40 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
8611943 8611943 PRJNA980839_P_NODE_229727_length_243_cov_0.905882_g225943_i0 PRJNA980839 229727 243 0.905882 2.20129326 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g225943 i0 100 0.119341563786008 29 0 12 0 159 187 1436319 1436291 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
9886708 9886708 PRJNA980839_P_NODE_209608_length_248_cov_0.880000_g205824_i0 PRJNA980839 209608 248 0.88 2.1824 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912988862|dbj|AP039593.1| 145626 g205824 i0 100 0.112903225806452 28 0 11 0 85 112 1064979 1064952 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 12, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
17535343 17535343 PRJNA980839_P_NODE_149394_length_287_cov_3.971963_g145610_i0 PRJNA980839 149394 287 3.971963 11.39953381 Elysia crispata 231223 Mollusca Mollusca 531 2.799999999999999e-146   NTclustered gi|2634110168|emb|OY973781.1| 231223 g145610 i0 100 4.39024390243902 287 0 100 0 1 287 8385 8671 Elysia crispata genome assembly, organelle: mitochondrion blastn 1260 531 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
18808743 18808743 PRJNA980839_P_NODE_124155_length_318_cov_1.608163_g120371_i0 PRJNA980839 124155 318 1.608163 5.11395834 Elysia crispata 231223 Mollusca Mollusca 582 8.549999999999998e-162   NTclustered gi|2634110168|emb|OY973781.1| 231223 g120371 i0 99.686 53.9591194968553 318 1 100 0 1 318 13155 13472 Elysia crispata genome assembly, organelle: mitochondrion blastn 17159 582 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
20086249 20086249 PRJNA980839_P_NODE_48836_length_618_cov_6.196330_g45105_i0 PRJNA980839 48836 618 6.19633 38.2933194 Elysia crispata 231223 Mollusca Mollusca 1125 0   NTclustered gi|2634110168|emb|OY973781.1| 231223 g45105 i0 99.515 72.5388349514563 618 3 100 0 1 618 8644 9261 Elysia crispata genome assembly, organelle: mitochondrion blastn 44829 1125 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;