RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA980839" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980839 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4787111 4787111 PRJNA980839_P_NODE_227564_length_243_cov_2.735294_g223780_i0 PRJNA980839 227564 243 2.735294 6.64676442 Nematocida ausubeli 1913371 Fungi Fungi 180 9.63e-41   NTclustered gi|2432061549|ref|XM_053050087.1| 1913371 g223780 i0 98.058 0.423868312757202 103 2 42 0 1 103 290 392 Nematocida ausubeli uncharacterized protein (NESG_02486), partial mRNA blastn 103 180 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida ausubeli
8609856 8609856 PRJNA980839_P_NODE_12887_length_1766_cov_111.367395_g11105_i0 PRJNA980839 12887 1766 111.367395 1966.7481957 Pleistophora mulleri 249366 Fungi Fungi 1690 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g11105 i0 84.243 37.0656851642129 1777 228 99 37 1 1743 3121 1363 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 65458 1690 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
14985802 14985802 PRJNA980839_P_NODE_17492_length_1446_cov_91.788055_g15217_i0 PRJNA980839 17492 1446 91.788055 1327.2552753 Fusasporis stethaprioni 2777717 Fungi Fungi 1954 0   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g15217 i0 94.113 89.5705394190871 1291 67 89 8 63 1349 1286 1 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 129519 1954 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;