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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA980839" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA980839 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4786040 4786040 PRJNA980839_P_NODE_169764_length_270_cov_2.553299_g165980_i0 PRJNA980839 169764 270 2.553299 6.8939073 Nolandia orientalis 1607835 SAR_Eukaryotes SAR_Eukaryotes 425 1.27e-114   NTclustered gi|759083538|gb|KM222155.1| 1607835 g165980 i0 95.167 99.9925925925926 269 13 99 0 1 269 888 620 Nolandia orientalis voucher PXM2010102401 large subunit ribosomal RNA gene, partial sequence blastn 26998 425 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Nolandia Nolandia orientalis
6063530 6063530 PRJNA980839_P_NODE_75545_length_439_cov_4.270492_g71761_i0 PRJNA980839 75545 439 4.270492 18.74745988 Alphamonas edax 2605704 SAR_Eukaryotes SAR_Eukaryotes 806 0   NTclustered gi|36140553|gb|AY234843.1| 2605704 g71761 i0 99.773 100.041002277904 440 0 100 1 1 439 988 549 Colpodella edax 18S ribosomal RNA gene, partial sequence blastn 43918 806 1 Eukaryota Sar         Alphamonaceae Alphamonas Alphamonas edax
7336409 7336409 PRJNA980839_P_NODE_210026_length_248_cov_0.880000_g206242_i0 PRJNA980839 210026 248 0.88 2.1824 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 278 3.4e-70   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g206242 i0 89.593 69.2016129032258 221 19 88 4 30 248 3901 3683 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17162 278 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
7338310 7338310 PRJNA980839_P_NODE_88246_length_393_cov_2.403125_g84462_i0 PRJNA980839 88246 393 2.403125 9.44428125 Alphamonas edax 2605704 SAR_Eukaryotes SAR_Eukaryotes 713 0   NTclustered gi|972268871|gb|KU159288.1| 2605704 g84462 i0 99.488 100.81679389313 391 2 99 0 1 391 2178 1788 Colpodella edax 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 39621 713 1 Eukaryota Sar         Alphamonaceae Alphamonas Alphamonas edax
8612733 8612733 PRJNA980839_P_NODE_53707_length_571_cov_4.242972_g49952_i0 PRJNA980839 53707 571 4.242972 24.22737012 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 137 1.51e-27   NTclustered gi|1315527750|gb|MF034900.1| 2065209 g49952 i0 84.028 23.4973730297723 144 22 25 1 97 239 9346 9489 Phytocercomonas venanatans 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13417 137 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans
8613264 8613264 PRJNA980839_P_NODE_80767_length_418_cov_3.478261_g76983_i0 PRJNA980839 80767 418 3.478261 14.53913098 Schizochytrium sp. ATCC 20888 368446 SAR_Eukaryotes SAR_Eukaryotes 399 1.2499999999999995e-106   NTclustered gi|85822988|gb|DQ356660.1| 368446 g76983 i0 85.233 96.9832535885167 386 57 92 0 20 405 983 598 Schizochytrium sp. ATCC 20888 actin gene, partial cds blastn 40539 399 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Schizochytrium Schizochytrium sp. ATCC 20888
8923140 8923140 PRJNA980839_P_NODE_216487_length_246_cov_1.364162_g212703_i0 PRJNA980839 216487 246 1.364162 3.35583852 Thalassiosiraceae 29202 SAR_Eukaryotes SAR_Eukaryotes 444 3.14e-120   NTclustered gi|2632235341|gb|OR922723.1| 35128 g212703 i0 99.187 100.00406504065 246 2 100 0 1 246 3591 3836 Thalassiosira pseudonana strain AGSB0188 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24601 444 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
12437372 12437372 PRJNA980839_P_NODE_188810_length_256_cov_2.349727_g185026_i0 PRJNA980839 188810 256 2.349727 6.01530112 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 472 1.51e-128   NTclustered gi|325194423|emb|FR825253.1| 890382 g185026 i0 100 99.61328125 255 0 99 0 2 256 901 647 Albugo laibachii Nc14, genomic contig CONTIG_1950_NC14_v4_1284_22758 blastn 25501 472 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
14984612 14984612 PRJNA980839_P_NODE_116392_length_330_cov_2.202335_g112608_i0 PRJNA980839 116392 330 2.202335 7.2677055 Nitzschia palea 303400 SAR_Eukaryotes SAR_Eukaryotes 316 9.98e-82   NTclustered gi|586947715|gb|KF913343.1| 303400 g112608 i0 85.535 4.83939393939394 318 29 96 9 15 330 739 437 Nitzschia palea strain M2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1597 316 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
17537673 17537673 PRJNA980839_P_NODE_49494_length_611_cov_3.661710_g45759_i0 PRJNA980839 49494 611 3.66171 22.3730481 Coleps hirtus 60000 SAR_Eukaryotes SAR_Eukaryotes 1066 0   NTclustered gi|328684911|gb|HM122027.1| 394492 g45759 i0 98.2 65.9230769230769 611 9 100 1 1 611 623 15 Coleps hirtus hirtus isolate SNK09101903 macronuclear blastn 40279 1066 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
18808284 18808284 PRJNA980839_P_NODE_101755_length_358_cov_2.164912_g97971_i0 PRJNA980839 101755 358 2.164912 7.75038496 Alphamonas edax 2605704 SAR_Eukaryotes SAR_Eukaryotes 640 5.689999999999999e-179   NTclustered gi|972268871|gb|KU159288.1| 2605704 g97971 i0 98.883 35.2905027932961 358 4 100 0 1 358 981 624 Colpodella edax 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12634 640 1 Eukaryota Sar         Alphamonaceae Alphamonas Alphamonas edax
21672111 21672111 PRJNA980839_P_NODE_119597_length_325_cov_1.833333_g115813_i0 PRJNA980839 119597 325 1.833333 5.95833225 Coleps 6003 SAR_Eukaryotes SAR_Eukaryotes 601 2.4199999999999993e-167   NTclustered gi|1825575437|gb|MT253687.1| 60000 g115813 i0 100 99.4953846153846 325 0 100 0 1 325 28 352 Coleps hirtus strain CCAP 1613/14 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 32336 601 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
23912444 23912444 PRJNA980839_P_NODE_55159_length_559_cov_1.742798_g51401_i0 PRJNA980839 55159 559 1.742798 9.74224082 Eimeria stiedai 471275 SAR_Eukaryotes SAR_Eukaryotes 553 1.2399999999999996e-152   NTclustered gi|511997|emb|Z33907.1| 471275 g51401 i0 98.718 5.98747763864043 312 2 56 2 1 311 311 1 E.stiedae (U82/129) DNA sequence (1173bp) blastn 3347 553 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria stiedai
24221551 24221551 PRJNA980839_P_NODE_147199_length_289_cov_3.185185_g143415_i0 PRJNA980839 147199 289 3.185185 9.20518465 root 1 Root_unresolved Root_unresolved 488 1.7199999999999998e-133   NTclustered gi|613433395|gb|KJ410683.1| 145522 g143415 i0 97.232 177.771626297578 289 7 100 1 1 289 64942 65229 Nannochloropsis oceanica strain LAMB0001 chloroplast, partial genome blastn 51376 490 0.995918367346939 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis oceanica
25183763 25183763 PRJNA980839_P_NODE_158520_length_280_cov_1.077295_g154736_i0 PRJNA980839 158520 280 1.077295 3.016426 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2643439136|emb|OX456574.1| 1481888 g154736 i0 100 0.1 28 0 10 0 142 169 16674 16701 Blepharisma stoltei strain ATCC30299 genome assembly, organelle: mitochondrion blastn 28 52.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;