RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980587 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
955925 955925 PRJNA980587_P_NODE_61861_length_288_cov_2.558140_g61068_i0 PRJNA980587 61861 288 2.55814 7.3674432 Sycon ciliatum 27933 Porifera other_Eukaryota 211 4.1500000000000002e-50   NTclustered gi|2732922087|ref|XM_065327921.1| 27933 g61068 i0 81.041 55.0104166666667 269 47 93 4 17 283 1317 1051 PREDICTED: Sycon ciliatum V-type proton ATPase subunit B-like (LOC135814754), mRNA blastn 15843 211 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
6058616 6058616 PRJNA980587_P_NODE_10545_length_853_cov_4.842308_g9860_i0 PRJNA980587 10545 853 4.842308 41.30488724 Halichondria panicea 6063 Porifera other_Eukaryota 193 4.85e-44   NTclustered gi|2719012651|ref|XM_064540040.1| 6063 g9860 i0 82.018 25.2356389214537 228 40 27 1 48 275 998 1224 PREDICTED: Halichondria panicea polyubiquitin (LOC135343089), mRNA blastn 21526 193 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;