contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12748721 | 12748721 | PRJNA980587_P_NODE_36410_length_391_cov_0.968553_g35617_i0 | PRJNA980587 | 36410 | 391 | 0.968553 | 3.78704223 | Chloroflexota | 200795 | Bacteria | Bacteria | 492 | 1.8599999999999998e-134 | NTclustered | gi|2814788344|emb|OY760098.2| | 2952883 | g35617 | i0 | 90.786 | 518.419437340153 | 369 | 33 | 99 | 1 | 22 | 389 | 1540032 | 1539664 | MAG: Aggregatilineales bacterium isolate 38e3f777-17bf-4c24-a9d7-54fd166e8adf genome assembly, chromosome: 1 | blastn | 202702 | 492 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Aggregatilineales | Aggregatilineales bacterium | ||||
| 13710017 | 13710017 | PRJNA980587_P_NODE_96731_length_209_cov_4.397059_g95938_i0 | PRJNA980587 | 96731 | 209 | 4.397059 | 9.18985331 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 252 | 1.68e-62 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g95938 | i0 | 88.517 | 18.0909090909091 | 209 | 22 | 99 | 2 | 2 | 209 | 275793 | 276000 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 3781 | 252 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 16258710 | 16258710 | PRJNA980587_P_NODE_5593_length_1219_cov_4.492147_g5114_i0 | PRJNA980587 | 5593 | 1219 | 4.492147 | 54.75927193 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 1256 | 0 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g5114 | i0 | 85.45 | 170.664479081214 | 1244 | 139 | 100 | 31 | 1 | 1219 | 273051 | 274277 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 208040 | 1256 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 18807879 | 18807879 | PRJNA980587_P_NODE_74935_length_258_cov_2.140541_g74142_i0 | PRJNA980587 | 74935 | 258 | 2.140541 | 5.52259578 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 243 | 1.3e-59 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g74142 | i0 | 84.836 | 230.031007751938 | 244 | 33 | 93 | 4 | 14 | 254 | 274570 | 274812 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 59348 | 243 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 24221139 | 24221139 | PRJNA980587_P_NODE_28039_length_460_cov_1.726098_g27246_i0 | PRJNA980587 | 28039 | 460 | 1.726098 | 7.9400508 | Chloroflexota | 200795 | Bacteria | Bacteria | 462 | 1.7399999999999999e-125 | NTclustered | gi|2621701642|emb|OY760398.1| | 2952883 | g27246 | i0 | 85.281 | 92.4630434782609 | 462 | 52 | 98 | 14 | 5 | 454 | 381154 | 380697 | MAG: Aggregatilineales bacterium isolate 948f1344-b363-40c2-9c6d-9b25e8b84bf3 genome assembly, chromosome: 1 | blastn | 42533 | 462 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Aggregatilineales | Aggregatilineales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;