RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA980587 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7333663 7333663 PRJNA980587_P_NODE_6306_length_1143_cov_2.504673_g5786_i0 PRJNA980587 6306 1143 2.504673 28.62841239 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 2061 0   NTclustered gi|1402550477|gb|MH488763.1| 2231161 g5786 i0 99.214 18.5459317585302 1145 5 100 2 1 1143 12 1154 Rosculus hawesi isolate C1C small subunit ribosomal RNA gene, partial sequence blastn 21198 2061 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
8608290 8608290 PRJNA980587_P_NODE_2327_length_1852_cov_33.892636_g2059_i1 PRJNA980587 2327 1852 33.892636 627.69161872 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 326 1.02e-83   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2059 i1 75.06 32.6549676025918 834 141 51 49 851 1670 1747 967 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 60477 326 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8608315 8608315 PRJNA980587_P_NODE_25387_length_490_cov_14.916067_g24595_i0 PRJNA980587 25387 490 14.916067 73.0887283 Viridiuvalis adhaerens 1977046 SAR_Eukaryotes SAR_Eukaryotes 99 6.05e-16   NTclustered gi|1248454657|dbj|LC229572.1| 1977046 g24595 i0 82.727 11.7673469387755 110 19 22 0 1 110 2850 2959 Viridiuvalis adhaerens gene for 28S ribosomal RNA, partial sequence blastn 5766 99 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Viridiuvalis Viridiuvalis adhaerens
11159321 11159321 PRJNA980587_P_NODE_63529_length_284_cov_2.957346_g62736_i0 PRJNA980587 63529 284 2.957346 8.39886264 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 518 2.15e-142   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g62736 i0 99.647 9.33802816901408 283 1 99 0 2 284 1677 1395 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 2652 518 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a
14983238 14983238 PRJNA980587_P_NODE_1692_length_2079_cov_9.729811_g1505_i0 PRJNA980587 1692 2079 9.729811 202.28277069 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 3064 0   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g1505 i0 93.451 27.965848965849 2092 93 99 30 2 2079 2082 21 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 58141 3064 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
16259177 16259177 PRJNA980587_P_NODE_89613_length_244_cov_0.900585_g88820_i0 PRJNA980587 89613 244 0.900585 2.1974274 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 279 9.27e-71   NTclustered gi|88792583|gb|DQ386164.1| 372086 g88820 i0 87.347 28.2540983606557 245 30 100 1 1 244 2219 1975 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 6894 279 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
17533450 17533450 PRJNA980587_P_NODE_31974_length_423_cov_7.845714_g31181_i0 PRJNA980587 31974 423 7.845714 33.18737022 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 189 2.98e-43   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g31181 i0 80.709 6.21040189125296 254 39 59 9 174 423 2836 2589 Rosculus vulgaris isolate CCA sequence blastn 2627 189 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
20082152 20082152 PRJNA980587_P_NODE_38676_length_376_cov_6.584158_g37883_i0 PRJNA980587 38676 376 6.584158 24.75643408 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 357 6.77e-94   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g37883 i0 84.293 37.406914893617 382 42 100 13 1 376 2202 2571 Rosculus vulgaris isolate CCA sequence blastn 14065 357 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;