RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA980587 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
955594 955594 PRJNA980587_P_NODE_36501_length_390_cov_1.441640_g35708_i0 PRJNA980587 36501 390 1.44164 5.622396 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.003   NTclustered gi|2794946715|ref|XM_067866338.1| 2049356 g35708 i0 100 4.54358974358974 30 0 8 0 122 151 3588 3559 Monocercomonoides exilis uncharacterized protein (MONOS_13620fu15920fu15921), partial mRNA blastn 1772 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
20082439 20082439 PRJNA980587_P_NODE_62236_length_287_cov_3.313084_g61443_i0 PRJNA980587 62236 287 3.313084 9.50855108 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 4.41e-5   NTclustered gi|2794968447|ref|XM_067876482.1| 2049356 g61443 i0 100 2.17770034843206 33 0 11 0 219 251 3746 3778 Monocercomonoides exilis putative non-canonical poly(A) RNA polymerase PAPD5/7 (MONOS_6263), mRNA blastn 625 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22632790 22632790 PRJNA980587_P_NODE_48618_length_330_cov_2.186770_g47825_i0 PRJNA980587 48618 330 2.18677 7.216341 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 368 2.72e-97   NTclustered gi|56684113|gb|AY831437.1| 2049356 g47825 i0 87.077 94.9181818181818 325 42 98 0 1 325 708 1032 Monocercomonoides sp. PA203 tubulin alpha subunit gene, partial cds blastn 31323 368 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;