contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2231725 | 2231725 | PRJNA980587_P_NODE_94742_length_241_cov_0.916667_g93949_i0 | PRJNA980587 | 94742 | 241 | 0.916667 | 2.20916747 | Microcoleus anatoxicus | 2705319 | Bacteria | Bacteria | 163 | 9.61e-36 | NTclustered | gi|2812421464|gb|CP120853.1| | 2705319 | g93949 | i0 | 80.09 | 1.83402489626556 | 221 | 43 | 91 | 1 | 22 | 241 | 2991699 | 2991479 | MAG: Microcoleus anatoxicus isolate Neu2020_A chromosome, complete genome | blastn | 442 | 163 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus anatoxicus | |
| 4783884 | 4783884 | PRJNA980587_P_NODE_46924_length_337_cov_1.159091_g46131_i0 | PRJNA980587 | 46924 | 337 | 1.159091 | 3.90613667 | Kalymmatonema hyalinum | 119533 | Bacteria | Bacteria | 617 | 2.4999999999999997e-172 | NTclustered | gi|1280084617|gb|MF574179.1| | 119533 | g46131 | i0 | 99.703 | 219.943620178042 | 337 | 1 | 100 | 0 | 1 | 337 | 4387 | 4723 | Scytonema hyalinum rrn type 2 operon, partial sequence; precursor RNA and 16S ribosomal RNA genes, 16S-23S internal transcribed spacer, tRNA-Ile, tRNA-Ala, and 23S ribosomal RNA genes and 23S-5S internal transcribed spacer, complete sequence; and 5S ribosomal RNA gene, partial sequence | blastn | 74121 | 617 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Kalymmatonema | Kalymmatonema hyalinum | |
| 8608313 | 8608313 | PRJNA980587_P_NODE_25147_length_494_cov_1.351544_g24356_i0 | PRJNA980587 | 25147 | 494 | 1.351544 | 6.67662736 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 558 | 2.33e-154 | NTclustered | gi|225696260|gb|FJ805927.1| | 259957 | g24356 | i0 | 93.817 | 89.1052631578947 | 372 | 21 | 75 | 2 | 1 | 372 | 2357 | 1988 | Uncultured Chroococcidiopsis sp. clone AS3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 44018 | 558 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 9883895 | 9883895 | PRJNA980587_P_NODE_53228_length_314_cov_1.680498_g52435_i0 | PRJNA980587 | 53228 | 314 | 1.680498 | 5.27676372 | Microcoleus vaginatus | 119532 | Bacteria | Bacteria | 520 | 6.6999999999999985e-143 | NTclustered | gi|2212803077|gb|CP031705.1| | 2303329 | g52435 | i0 | 96.497 | 65.0764331210191 | 314 | 11 | 100 | 0 | 1 | 314 | 5006514 | 5006201 | Microcoleus vaginatus HSN003, whole genome shotgun sequence | blastn | 20434 | 520 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus vaginatus | |
| 9884206 | 9884206 | PRJNA980587_P_NODE_77708_length_252_cov_1.541899_g76915_i0 | PRJNA980587 | 77708 | 252 | 1.541899 | 3.88558548 | Microcoleus vaginatus | 119532 | Bacteria | Bacteria | 344 | 3.37e-90 | NTclustered | gi|2212798032|gb|CP031740.1| | 669365 | g76915 | i0 | 91.27 | 41.5873015873016 | 252 | 22 | 100 | 0 | 1 | 252 | 2752134 | 2751883 | Microcoleus vaginatus PCC 9802 chromosome, complete genome | blastn | 10480 | 344 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus vaginatus | |
| 9884250 | 9884250 | PRJNA980587_P_NODE_80208_length_250_cov_0.870056_g79415_i0 | PRJNA980587 | 80208 | 250 | 0.870056 | 2.17514 | cyanobacterium NIES-36 | 2510787 | Bacteria | Bacteria | 333 | 7.219999999999999e-87 | NTclustered | gi|1566846291|dbj|LC455671.1| | 2510787 | g79415 | i0 | 90.8 | 188.396 | 250 | 22 | 100 | 1 | 1 | 250 | 13 | 261 | Cyanobacterium NIES-36 gene for 23S ribosomal RNA, partial sequence | blastn | 47099 | 333 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | cyanobacterium NIES-36 | |||||
| 12434541 | 12434541 | PRJNA980587_P_NODE_17090_length_629_cov_1.606115_g16313_i0 | PRJNA980587 | 17090 | 629 | 1.606115 | 10.10246335 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 913 | 0 | NTclustered | gi|225696274|gb|FJ805941.1| | 259957 | g16313 | i0 | 92.971 | 104.758346581876 | 626 | 44 | 99 | 0 | 4 | 629 | 2423 | 3048 | Uncultured Chroococcidiopsis sp. clone NA1_11 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 65893 | 913 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 14983454 | 14983454 | PRJNA980587_P_NODE_38932_length_375_cov_1.476821_g38139_i0 | PRJNA980587 | 38932 | 375 | 1.476821 | 5.53807875 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 516 | 1.05e-141 | NTclustered | gi|225696224|gb|FJ805891.1| | 259957 | g38139 | i0 | 92.541 | 200.477333333333 | 362 | 23 | 96 | 3 | 17 | 375 | 1744 | 2104 | Uncultured Chroococcidiopsis sp. clone NA2_5 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 75179 | 516 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 14983633 | 14983633 | PRJNA980587_P_NODE_53152_length_314_cov_3.443983_g52359_i0 | PRJNA980587 | 53152 | 314 | 3.443983 | 10.81410662 | Prochlorothrix hollandica | 1223 | Bacteria | Bacteria | 337 | 7.239999999999998e-88 | NTclustered | gi|146740638|emb|AM709625.1| | 317619 | g52359 | i0 | 86.435 | 174.468152866242 | 317 | 32 | 99 | 11 | 1 | 313 | 2824 | 3133 | Prochlorothrix hollandica SAG 10.89 partial ribosomal RNA operon, strain SAG 10.89 | blastn | 54783 | 337 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Prochlorotrichales | Prochlorotrichaceae | Prochlorothrix | Prochlorothrix hollandica | |
| 16259152 | 16259152 | PRJNA980587_P_NODE_87433_length_245_cov_2.686047_g86640_i0 | PRJNA980587 | 87433 | 245 | 2.686047 | 6.58081515 | Kalymmatonema hyalinum | 119533 | Bacteria | Bacteria | 431 | 2.4299999999999996e-116 | NTclustered | gi|1280084616|gb|MF574178.1| | 119533 | g86640 | i0 | 98.367 | 267.902040816327 | 245 | 4 | 100 | 0 | 1 | 245 | 2589 | 2833 | Scytonema hyalinum rrn type 2 operon, precursor RNA, transcribed leader region, and 16S ribosomal RNA genes, 16S-23S internal transcribed spacer, tRNA-Ile, tRNA-Ala, and 23S ribosomal RNA genes, 23S-5S internal transcribed spacer, and 5S ribosomal RNA gene, complete sequence | blastn | 65636 | 431 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Kalymmatonema | Kalymmatonema hyalinum | |
| 16572064 | 16572064 | PRJNA980587_P_NODE_57073_length_302_cov_1.834061_g56280_i0 | PRJNA980587 | 57073 | 302 | 1.834061 | 5.53886422 | Microcoleus | 44471 | Bacteria | Bacteria | 398 | 3.1399999999999993e-106 | NTclustered | gi|2212798032|gb|CP031740.1| | 669365 | g56280 | i0 | 90.397 | 17.7086092715232 | 302 | 29 | 100 | 0 | 1 | 302 | 3444455 | 3444154 | Microcoleus vaginatus PCC 9802 chromosome, complete genome | blastn | 5348 | 398 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus vaginatus | |
| 16572156 | 16572156 | PRJNA980587_P_NODE_89133_length_244_cov_1.801170_g88340_i0 | PRJNA980587 | 89133 | 244 | 1.80117 | 4.3948548 | Microcoleus | 44471 | Bacteria | Bacteria | 346 | 9.019999999999999e-91 | NTclustered | gi|2212798032|gb|CP031740.1| | 669365 | g88340 | i0 | 92.562 | 5.66803278688525 | 242 | 16 | 99 | 2 | 3 | 243 | 6208936 | 6208696 | Microcoleus vaginatus PCC 9802 chromosome, complete genome | blastn | 1383 | 346 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus vaginatus | |
| 18807606 | 18807606 | PRJNA980587_P_NODE_54795_length_309_cov_1.699153_g54002_i0 | PRJNA980587 | 54795 | 309 | 1.699153 | 5.25038277 | Picosynechococcus sp. PCC 7003 | 374981 | Bacteria | Bacteria | 420 | 6.87e-113 | NTclustered | gi|2275105|emb|X97393.1| | 374981 | g54002 | i0 | 92.23 | 8.69902912621359 | 296 | 23 | 96 | 0 | 9 | 304 | 299 | 4 | Synechococcus sp. rnpB gene, strain PCC7003 | blastn | 2688 | 420 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Geminocystaceae | Picosynechococcus | Picosynechococcus sp. PCC 7003 | |
| 22632634 | 22632634 | PRJNA980587_P_NODE_37418_length_384_cov_1.585209_g36625_i0 | PRJNA980587 | 37418 | 384 | 1.585209 | 6.08720256 | Nostocales cyanobacterium HT-58-2 | 1940762 | Bacteria | Bacteria | 599 | 1.0399999999999995e-166 | NTclustered | gi|1199827411|gb|CP019636.1| | 1940762 | g36625 | i0 | 94.805 | 149.424479166667 | 385 | 19 | 100 | 1 | 1 | 384 | 744428 | 744044 | Nostocales cyanobacterium HT-58-2 chromosome, complete genome | blastn | 57379 | 599 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocales cyanobacterium HT-58-2 | |||
| 22633182 | 22633182 | PRJNA980587_P_NODE_76318_length_255_cov_1.692308_g75525_i0 | PRJNA980587 | 76318 | 255 | 1.692308 | 4.3153854 | Microcoleus anatoxicus | 2705319 | Bacteria | Bacteria | 344 | 3.41e-90 | NTclustered | gi|2812421464|gb|CP120853.1| | 2705319 | g75525 | i0 | 91.051 | 14.6117647058824 | 257 | 19 | 100 | 4 | 1 | 255 | 6116025 | 6116279 | MAG: Microcoleus anatoxicus isolate Neu2020_A chromosome, complete genome | blastn | 3726 | 344 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus anatoxicus | |
| 22633229 | 22633229 | PRJNA980587_P_NODE_79198_length_251_cov_0.865169_g78405_i0 | PRJNA980587 | 79198 | 251 | 0.865169 | 2.17157419 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 292 | 1.2299999999999999e-74 | NTclustered | gi|225696254|gb|FJ805921.1| | 259957 | g78405 | i0 | 88 | 158.729083665339 | 250 | 26 | 99 | 4 | 1 | 248 | 2901 | 3148 | Uncultured Chroococcidiopsis sp. clone SA1_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 39841 | 292 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 23908172 | 23908172 | PRJNA980587_P_NODE_45759_length_341_cov_2.279851_g44966_i0 | PRJNA980587 | 45759 | 341 | 2.279851 | 7.77429191 | Cylindrospermum sp. UTEX LB 942 | 2137584 | Bacteria | Bacteria | 344 | 4.75e-90 | NTclustered | gi|1373447557|gb|KY979119.1| | 2137584 | g44966 | i0 | 85.044 | 69.8445747800587 | 341 | 47 | 99 | 3 | 2 | 341 | 690 | 353 | Cylindrospermum sp. UTEX LB 942 23S ribosomal RNA gene, partial sequence | blastn | 23817 | 344 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Cylindrospermum | Cylindrospermum sp. UTEX LB 942 | |
| 23908772 | 23908772 | PRJNA980587_P_NODE_89159_length_244_cov_1.795322_g88366_i0 | PRJNA980587 | 89159 | 244 | 1.795322 | 4.38058568 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 278 | 3.34e-70 | NTclustered | gi|225696188|gb|FJ805855.1| | 259957 | g88366 | i0 | 87.552 | 93.077868852459 | 241 | 29 | 99 | 1 | 3 | 243 | 2839 | 3078 | Uncultured Chroococcidiopsis sp. clone AR2_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 22711 | 278 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 25182530 | 25182530 | PRJNA980587_P_NODE_95460_length_241_cov_0.916667_g94667_i0 | PRJNA980587 | 95460 | 241 | 0.916667 | 2.20916747 | Phormidium nigroviride | 482564 | Bacteria | Bacteria | 357 | 4.1099999999999997e-94 | NTclustered | gi|428238862|gb|CP003614.1| | 179408 | g94667 | i0 | 93.361 | 6.95850622406639 | 241 | 16 | 100 | 0 | 1 | 241 | 1034777 | 1034537 | Oscillatoria nigro-viridis PCC 7112 chromosome, complete genome | blastn | 1677 | 357 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Phormidium | Phormidium nigroviride | |
| 25496128 | 25496128 | PRJNA980587_P_NODE_96760_length_200_cov_4.732283_g95967_i0 | PRJNA980587 | 96760 | 200 | 4.732283 | 9.464566 | Bacteria | 2 | Bacteria | Bacteria | 370 | 4.22e-98 | NTclustered | gi|389547840|gb|JQ402768.1| | 1211 | g95967 | i0 | 100 | 99.115 | 200 | 0 | 100 | 0 | 1 | 200 | 692 | 493 | Uncultured cyanobacterium clone CNY_03229 16S ribosomal RNA gene, partial sequence | blastn | 19823 | 370 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;