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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA980587" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA980587 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
955864 955864 PRJNA980587_P_NODE_5661_length_1211_cov_8.995606_g5178_i0 PRJNA980587 5661 1211 8.995606 108.93678866 Copromyxa protea 931554 Tubulinea other_Eukaryota 894 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g5178 i0 84.945 11.5350949628406 910 107 73 21 274 1159 486 1389 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 13969 894 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
955956 955956 PRJNA980587_P_NODE_64161_length_283_cov_1.404762_g63368_i0 PRJNA980587 64161 283 1.404762 3.97547646 Didymium melanospermum 385451 Evosea other_Eukaryota 217 8.75e-52   NTclustered gi|2049856315|gb|MG963497.1| 385451 g63368 i0 81.413 64.6148409893993 269 46 94 4 1 267 133 399 Didymium melanospermum strain MA-Fungi 91238 elongation factor 1A (EF1a) gene, partial cds blastn 18286 217 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium melanospermum
1269616 1269616 PRJNA980587_P_NODE_8061_length_995_cov_9.647505_g7459_i0 PRJNA980587 8061 995 9.647505 95.99267475 Dictyostelium 5782 Evosea other_Eukaryota 348 1.15e-90   NTclustered gi|290046|gb|L11588.1|DDIRACIA 44689 g7459 i0 84.419 16.7798994974874 353 55 35 0 25 377 34 386 Dictyostelium discoideum rac1A protein mRNA, complete cds blastn 16696 348 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2231040 2231040 PRJNA980587_P_NODE_47302_length_335_cov_1.923664_g46509_i0 PRJNA980587 47302 335 1.923664 6.4442744 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 104 8.6e-18   NTclustered gi|426281760|gb|JX681133.1| 1048528 g46509 i0 91.026 0.232835820895522 78 6 23 1 223 299 104 181 Stemonitopsis subcaespitosa actin gene, partial cds blastn 78 104 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
2231124 2231124 PRJNA980587_P_NODE_53262_length_314_cov_1.485477_g52469_i0 PRJNA980587 53262 314 1.485477 4.66439778 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 198 3.57e-46   NTclustered gi|354683888|gb|JN048920.1| 361077 g52469 i0 79.125 2.51910828025478 297 55 94 7 14 307 7 299 Tieghemostelium lacteum 60S ribosomal protein L5 gene, complete cds blastn 791 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
3506080 3506080 PRJNA980587_P_NODE_34763_length_402_cov_1.854103_g33970_i0 PRJNA980587 34763 402 1.854103 7.45349406 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 163 1.7099999999999998e-35   NTclustered gi|470531480|ref|XM_004358015.1| 1257118 g33970 i0 78.486 17.1940298507463 251 52 62 2 102 351 296 47 Acanthamoeba castellanii str. Neff ribosomal protein L31e, putative (ACA1_119160), partial mRNA blastn 6912 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4784180 4784180 PRJNA980587_P_NODE_68064_length_274_cov_1.268657_g67271_i0 PRJNA980587 68064 274 1.268657 3.47612018 Heterostelium album 2086695 Evosea other_Eukaryota 180 1.11e-40   NTclustered gi|1160559656|ref|XM_020577932.1| 670386 g67271 i0 78.7 56.3503649635037 277 53 100 6 1 274 829 556 Polysphondylium pallidum PN500 isocitrate dehydrogenase (idhC), partial mRNA blastn 15440 180 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11158904 11158904 PRJNA980587_P_NODE_30229_length_438_cov_3.712329_g29436_i0 PRJNA980587 30229 438 3.712329 16.26000102 Copromyxa protea 931554 Tubulinea other_Eukaryota 603 9.32e-168   NTclustered gi|508737347|dbj|AB766053.1| 931554 g29436 i0 91.879 26.1529680365297 431 35 98 0 8 438 491 61 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 11455 603 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
12434839 12434839 PRJNA980587_P_NODE_43830_length_349_cov_2.655797_g43037_i0 PRJNA980587 43830 349 2.655797 9.26873153 Ripella decalvata 2047822 Discosea other_Eukaryota 555 2.0599999999999994e-153   NTclustered gi|1269228437|gb|MF683562.1| 2047822 g43037 i0 95.442 95.9140401146132 351 11 99 5 2 349 985 637 Ripella decalvata clone 15101 18S ribosomal RNA gene, partial sequence blastn 33474 555 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
13709295 13709295 PRJNA980587_P_NODE_4491_length_1370_cov_104.513493_g4073_i0 PRJNA980587 4491 1370 104.513493 1431.8348541 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 1170 0   NTclustered gi|426281760|gb|JX681133.1| 1048528 g4073 i0 90.359 81.0956204379562 892 85 65 1 275 1166 896 6 Stemonitopsis subcaespitosa actin gene, partial cds blastn 111101 1170 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
17534052 17534052 PRJNA980587_P_NODE_76674_length_254_cov_2.458564_g75881_i0 PRJNA980587 76674 254 2.458564 6.24475256 Dictyostelium discoideum 44689 Evosea other_Eukaryota 344 3.4e-90   NTclustered gi|1040460865|dbj|LC159244.1| 44689 g75881 i0 90.977 37.6732283464567 266 9 99 9 2 254 480 217 Dictyostelium discoideum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S rRNA, partial and complete sequence, strain: WS-18 blastn 9569 344 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18807165 18807165 PRJNA980587_P_NODE_18655_length_595_cov_8.406130_g17872_i0 PRJNA980587 18655 595 8.40613 50.0164735 Platyamoeba placida 3454475 Discosea other_Eukaryota 756 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g17872 i0 89.58 98.8890756302521 595 62 100 0 1 595 1127 533 Platyamoeba placida actin mRNA, partial cds blastn 58839 756 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
18807296 18807296 PRJNA980587_P_NODE_32615_length_418_cov_1.597101_g31822_i0 PRJNA980587 32615 418 1.597101 6.67588218 Copromyxa sp. PKD 2011 1215977 Tubulinea other_Eukaryota 773 0   NTclustered gi|399764167|gb|JQ271678.1| 1215977 g31822 i0 100 40.1411483253588 418 0 100 0 1 418 1295 1712 Copromyxa sp. PKD 2011 strain ZEB1 18S ribosomal RNA gene, partial sequence blastn 16779 773 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa sp. PKD 2011
18807450 18807450 PRJNA980587_P_NODE_44835_length_345_cov_1.790441_g44042_i0 PRJNA980587 44835 345 1.790441 6.17702145 Platyamoeba placida 3454475 Discosea other_Eukaryota 444 4.6099999999999996e-120   NTclustered gi|33946348|gb|AY294153.1| 197527 g44042 i0 90.294 96.2608695652174 340 32 98 1 7 345 85 424 Platyamoeba placida actin mRNA, partial cds blastn 33210 444 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
18807579 18807579 PRJNA980587_P_NODE_53495_length_313_cov_1.837500_g52702_i0 PRJNA980587 53495 313 1.8375 5.751375 Acytostelium subglobosum 361139 Evosea other_Eukaryota 198 3.55e-46   NTclustered gi|831772027|ref|XM_012898029.1| 1410327 g52702 i0 78.689 2.06389776357827 305 59 96 6 6 307 1282 1583 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 646 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
20082045 20082045 PRJNA980587_P_NODE_30116_length_439_cov_3.098361_g29323_i0 PRJNA980587 30116 439 3.098361 13.60180479 Dictyostelium purpureum 5786 Evosea other_Eukaryota 58.4 0.001   NTclustered gi|330792848|ref|XM_003284451.1| 5786 g29323 i0 100 0.0706150341685649 31 0 7 0 103 133 206 176 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_96730), partial mRNA blastn 31 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20082455 20082455 PRJNA980587_P_NODE_63976_length_283_cov_2.200000_g63183_i0 PRJNA980587 63976 283 2.2 6.226 Entamoeba dispar 46681 Evosea other_Eukaryota 183 8.879999999999997e-42   NTclustered gi|167386633|ref|XM_001737796.1| 370354 g63183 i0 79.615 4.25088339222615 260 49 91 4 26 283 915 658 Entamoeba dispar SAW760 26S protease regulatory subunit 6B, putative (EDI_044950), partial mRNA blastn 1203 183 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
20082597 20082597 PRJNA980587_P_NODE_73836_length_261_cov_1.281915_g73043_i0 PRJNA980587 73836 261 1.281915 3.34579815 Vannella septentrionalis 197531 Discosea other_Eukaryota 431 2.62e-116   NTclustered gi|300078499|gb|GU001161.1| 197531 g73043 i0 96.538 0.996168582375479 260 9 99 0 1 260 1358 1617 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 260 431 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
20082607 20082607 PRJNA980587_P_NODE_7456_length_1040_cov_2.747673_g6876_i0 PRJNA980587 7456 1040 2.747673 28.5757992 Dictyostelium purpureum 5786 Evosea other_Eukaryota 856 0   NTclustered gi|330802803|ref|XM_003289355.1| 5786 g6876 i0 82.247 93.6663461538461 997 171 96 6 1 994 1039 46 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72679), mRNA blastn 97413 856 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21357489 21357489 PRJNA980587_P_NODE_28097_length_459_cov_4.329016_g27304_i0 PRJNA980587 28097 459 4.329016 19.87018344 Hartmannella cantabrigiensis 239731 Tubulinea other_Eukaryota 721 0   NTclustered gi|33946358|gb|AY294158.1| 239731 g27304 i0 95.556 93.442265795207 450 20 98 0 10 459 1149 700 Hartmannella cantabrigiensis actin mRNA, complete cds blastn 42890 721 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Hartmannella Hartmannella cantabrigiensis
21357964 21357964 PRJNA980587_P_NODE_61977_length_288_cov_1.432558_g61184_i0 PRJNA980587 61977 288 1.432558 4.12576704 Physarum polycephalum 5791 Evosea other_Eukaryota 278 4.04e-70   NTclustered gi|15284033|dbj|AB070528.1| 5791 g61184 i0 84.507 140.513888888889 284 40 98 4 1 282 374 93 Physarum polycephalum ub4 mRNA for ubiquitin 4, complete cds blastn 40468 278 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
23908277 23908277 PRJNA980587_P_NODE_52999_length_315_cov_1.272727_g52206_i0 PRJNA980587 52999 315 1.272727 4.00909005 Acanthamoeba astronyxis 65658 Discosea other_Eukaryota 99 3.73e-16   NTclustered gi|28194602|gb|AF479546.1| 65658 g52206 i0 77.401 12.4920634920635 177 33 55 6 142 314 682 855 Acanthamoeba astronyxis strain ATCC 30137 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 3935 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba astronyxis
25181990 25181990 PRJNA980587_P_NODE_57620_length_301_cov_0.916667_g56827_i0 PRJNA980587 57620 301 0.916667 2.75916767 Cavostelium apophysatum 435410 Evosea other_Eukaryota 287 7.050000000000001e-73   NTclustered gi|146448837|gb|EF513185.1| 435410 g56827 i0 84.354 89.5980066445183 294 44 97 2 7 299 467 759 Cavostelium apophysatum elongation factor 1A (EF1A) gene, partial cds blastn 26969 287 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;