RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1269438 1269438 PRJNA980585_P_NODE_54781_length_244_cov_0.900585_g54527_i0 PRJNA980585 54781 244 0.900585 2.1974274 Poecilosclerida 27925 Porifera other_Eukaryota 228 3.409999999999999e-55   NTclustered gi|321266699|gb|HQ379294.1| 942674 g54527 i0 89.503 74.1803278688525 181 18 74 1 1 180 328 148 Amphilectus fucorum voucher BELUM:Mc5093 28S ribosomal RNA gene, partial sequence blastn 18100 228 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Esperiopsidae Amphilectus Amphilectus fucorum
7332821 7332821 PRJNA980585_P_NODE_49606_length_247_cov_0.885057_g49352_i0 PRJNA980585 49606 247 0.885057 2.18609079 Dysidea avara 196820 Porifera other_Eukaryota 56.5 0.002   NTclustered gi|2749536920|ref|XM_066036925.1| 196820 g49352 i0 100 0.97165991902834 30 0 12 0 154 183 2342 2371 PREDICTED: Dysidea avara pre-mRNA-splicing factor CWC22 homolog (LOC136245401), transcript variant X1, mRNA blastn 240 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
9883027 9883027 PRJNA980585_P_NODE_4188_length_608_cov_1.444860_g3934_i0 PRJNA980585 4188 608 1.44486 8.7847488 Sycon ciliatum 27933 Porifera other_Eukaryota 69.4 5.98e-7   NTclustered gi|2732893172|ref|XM_065342724.1| 27933 g3934 i0 86.885 0.672697368421053 61 8 10 0 541 601 578 518 PREDICTED: Sycon ciliatum sterol carrier protein 2-like (LOC135830473), mRNA blastn 409 69.4 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
11473209 11473209 PRJNA980585_P_NODE_5409_length_546_cov_2.505285_g5155_i0 PRJNA980585 5409 546 2.505285 13.6788561 Opisthokonta 33154 Porifera other_Eukaryota 60.2 3.21e-4   NTclustered gi|2732903919|ref|XM_065339950.1| 27933 g5155 i0 92.683 1.38461538461538 41 3 8 0 415 455 1653 1613 PREDICTED: Sycon ciliatum hormone receptor 4-like (LOC135827457), mRNA blastn 756 60.2 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;