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contig_metadata

34 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA980585 · 34 ✖

analysis 1

  • blastn · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
954544 954544 PRJNA980585_P_NODE_21641_length_314_cov_0.958506_g21387_i0 PRJNA980585 21641 314 0.958506 3.00970884 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 91.6 6.23e-14   NTclustered gi|669149541|ref|XM_008612111.1| 1156394 g21387 i0 80 10.5891719745223 130 20 40 4 96 222 315 441 Saprolegnia diclina VS20 50S ribosomal protein L40e mRNA blastn 3325 91.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
955250 955250 PRJNA980585_P_NODE_6401_length_509_cov_2.775229_g6147_i0 PRJNA980585 6401 509 2.775229 14.12591561 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 281 5.83e-71   NTclustered gi|698807229|ref|XM_009838342.1| 112090 g6147 i0 80.533 66.4597249508841 375 65 72 4 133 500 441 68 Aphanomyces astaci polyubiquitin mRNA blastn 33828 281 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
955292 955292 PRJNA980585_P_NODE_8621_length_449_cov_1.433511_g8367_i0 PRJNA980585 8621 449 1.433511 6.43646439 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 219 4.0499999999999996e-52   NTclustered gi|675187766|ref|XM_008904520.1| 761204 g8367 i0 80.272 32.3207126948775 294 54 65 4 158 449 670 379 Phytophthora parasitica INRA-310 GTP-binding nuclear protein ran-1 mRNA blastn 14512 219 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
2230251 2230251 PRJNA980585_P_NODE_39662_length_253_cov_1.283333_g39408_i0 PRJNA980585 39662 253 1.283333 3.24683249 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 316 7.37e-82   NTclustered gi|698813671|ref|XM_009841563.1| 112090 g39408 i0 89.558 23.7470355731225 249 26 98 0 3 251 277 29 Aphanomyces astaci hypothetical protein mRNA blastn 6008 316 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
2544967 2544967 PRJNA980585_P_NODE_1882_length_858_cov_2.387261_g1663_i0 PRJNA980585 1882 858 2.387261 20.48269938 Globisporangium 1448052 SAR_Eukaryotes SAR_Eukaryotes 691 0   NTclustered gi|1780534031|gb|MK753001.1| 2052683 g1663 i0 82.2 88.3461538461538 809 138 94 6 1 806 818 13 Globisporangium ultimum var. ultimum isolate KSSO_5-45 beta-tubulin mRNA, complete cds blastn 75801 691 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium ultimum
2544995 2544995 PRJNA980585_P_NODE_25062_length_295_cov_2.081081_g24808_i0 PRJNA980585 25062 295 2.081081 6.13918895 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 185 2.5899999999999998e-42   NTclustered gi|695406798|ref|XM_009525911.1| 67593 g24808 i0 81.034 70.7254237288136 232 44 79 0 1 232 290 59 Phytophthora sojae hypothetical protein partial mRNA blastn 20864 185 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
3505130 3505130 PRJNA980585_P_NODE_22103_length_311_cov_1.436975_g21849_i0 PRJNA980585 22103 311 1.436975 4.46899225 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 93.5 1.71e-14   NTclustered gi|669163369|ref|XM_008619025.1| 1156394 g21849 i0 88.312 1.45659163987138 77 9 25 0 235 311 294 370 Saprolegnia diclina VS20 hypothetical protein mRNA blastn 453 93.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
4782972 4782972 PRJNA980585_P_NODE_33984_length_268_cov_2.271795_g33730_i0 PRJNA980585 33984 268 2.271795 6.0884106 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 263 1.04e-65   NTclustered gi|695448559|ref|XM_009536718.1| 67593 g33730 i0 84.701 72.6940298507463 268 35 100 3 1 268 803 542 Phytophthora sojae ATP synthase beta subunit mRNA blastn 19482 263 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
4783190 4783190 PRJNA980585_P_NODE_48444_length_247_cov_0.885057_g48190_i0 PRJNA980585 48444 247 0.885057 2.18609079 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 134 7.750000000000001e-27   NTclustered gi|695392270|ref|XM_009521989.1| 67593 g48190 i0 77.366 0.983805668016194 243 44 97 10 4 242 84 319 Phytophthora sojae hypothetical protein mRNA blastn 243 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
6058502 6058502 PRJNA980585_P_NODE_60005_length_241_cov_0.916667_g59751_i0 PRJNA980585 60005 241 0.916667 2.20916747 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 84.2 7.69e-12   NTclustered gi|695425354|ref|XM_009530860.1| 67593 g59751 i0 89.552 0.556016597510373 67 6 28 1 3 69 495 430 Phytophthora sojae hypothetical protein partial mRNA blastn 134 84.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
6373361 6373361 PRJNA980585_P_NODE_24665_length_297_cov_2.473214_g24411_i0 PRJNA980585 24665 297 2.473214 7.34544558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 193 1.56e-44   NTclustered gi|2794930454|ref|XM_067885800.1| 164328 g24411 i0 88.679 54.2760942760943 159 16 53 2 140 297 1125 1282 Phytophthora ramorum Chaperonin CPN60-2, mitochondrial (KRP23_14921), partial mRNA blastn 16120 193 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
8608123 8608123 PRJNA980585_P_NODE_7167_length_485_cov_14.577670_g6913_i0 PRJNA980585 7167 485 14.57767 70.7016995 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 405 3.15e-108   NTclustered gi|2794923360|ref|XM_067881981.1| 164328 g6913 i0 83.108 88.0536082474227 444 75 92 0 42 485 450 7 Phytophthora ramorum Calmodulin (KRP23_11430), partial mRNA blastn 42706 405 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
8922248 8922248 PRJNA980585_P_NODE_30867_length_277_cov_1.509804_g30613_i0 PRJNA980585 30867 277 1.509804 4.18215708 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 178 4.029999999999999e-40   NTclustered gi|58202010|gb|AY898628.1| 4787 g30613 i0 88.591 55.1371841155235 149 14 53 3 130 277 2467 2321 Phytophthora infestans haplotype IIb mitochondrion, complete genome blastn 15273 178 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
9882717 9882717 PRJNA980585_P_NODE_25188_length_295_cov_1.229730_g24934_i0 PRJNA980585 25188 295 1.22973 3.6277035 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 337 6.75e-88   NTclustered gi|698818824|ref|XM_009844139.1| 112090 g24934 i0 87.805 4.08813559322034 287 35 97 0 7 293 360 74 Aphanomyces astaci hypothetical protein mRNA blastn 1206 337 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
9882996 9882996 PRJNA980585_P_NODE_39948_length_252_cov_1.290503_g39694_i0 PRJNA980585 39948 252 1.290503 3.25206756 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 327 3.39e-85   NTclustered gi|698812547|ref|XM_009841001.1| 112090 g39694 i0 90.079 2 252 25 100 0 1 252 439 188 Aphanomyces astaci hypothetical protein mRNA blastn 504 327 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
9883296 9883296 PRJNA980585_P_NODE_60408_length_241_cov_0.916667_g60154_i0 PRJNA980585 60408 241 0.916667 2.20916747 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 126 1.26e-24   NTclustered gi|698778246|ref|XM_009823865.1| 112090 g60154 i0 79.082 0.813278008298755 196 32 81 6 42 237 571 385 Aphanomyces astaci hypothetical protein mRNA blastn 196 126 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
11157858 11157858 PRJNA980585_P_NODE_13609_length_374_cov_1.279070_g13355_i0 PRJNA980585 13609 374 1.27907 4.7837218 Achlya klebsiana 4767 SAR_Eukaryotes SAR_Eukaryotes 431 3.91e-116   NTclustered gi|166303|gb|J05116.1|ACKCAL 4767 g13355 i0 88.889 92.5267379679144 351 37 94 2 6 355 842 493 A.klebsiana calmodulin gene, complete cds blastn 34605 431 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
12434422 12434422 PRJNA980585_P_NODE_62250_length_203_cov_4.230769_g61996_i0 PRJNA980585 62250 203 4.230769 8.58846107 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 152 1.7e-32   NTclustered gi|166053060|emb|CU351626.1| 100861 g61996 i0 83.133 14.8571428571429 166 28 82 0 20 185 52 217 Aphanomyces euteiches cDNA blastn 3016 152 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
13708098 13708098 PRJNA980585_P_NODE_17871_length_337_cov_1.412879_g17617_i0 PRJNA980585 17871 337 1.412879 4.76140223 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 202 2.9799999999999998e-47   NTclustered gi|2795020654|ref|XM_067935541.1| 4785 g17617 i0 80.524 32.9347181008902 267 48 79 4 10 274 300 36 Phytophthora cinnamomi Heat shock protein 90-2 (IUM83_11008), partial mRNA blastn 11099 202 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
13708892 13708892 PRJNA980585_P_NODE_8191_length_459_cov_1.010363_g7937_i0 PRJNA980585 8191 459 1.010363 4.63756617 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 507 7.91e-139   NTclustered gi|698796453|ref|XM_009832954.1| 112090 g7937 i0 88.675 24.2265795206972 415 47 90 0 18 432 53 467 Aphanomyces astaci 60S ribosomal protein L23 mRNA blastn 11120 507 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
14982243 14982243 PRJNA980585_P_NODE_11052_length_406_cov_0.828829_g10798_i0 PRJNA980585 11052 406 0.828829 3.36504574 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 252 3.5799999999999997e-62   NTclustered gi|673019533|ref|XM_008865506.1| 157072 g10798 i0 88.152 15.4433497536946 211 25 52 0 194 404 107 317 Aphanomyces invadans hypothetical protein mRNA blastn 6270 252 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
18806280 18806280 PRJNA980585_P_NODE_18095_length_335_cov_5.568702_g17841_i0 PRJNA980585 18095 335 5.568702 18.6551517 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 196 1.38e-45   NTclustered gi|695377665|ref|XM_009517770.1| 67593 g17841 i0 80.972 2.85671641791045 247 47 74 0 79 325 128 374 Phytophthora sojae hypothetical protein mRNA blastn 957 196 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
19120691 19120691 PRJNA980585_P_NODE_26055_length_290_cov_4.235023_g25801_i0 PRJNA980585 26055 290 4.235023 12.2815667 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 239 1.92e-58   NTclustered gi|813118806|ref|XM_012340678.1| 695850 g25801 i0 83.206 1.76206896551724 262 42 90 2 1 260 24 285 Saprolegnia parasitica CBS 223.65 50S ribosomal protein L36e mRNA blastn 511 239 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
20081023 20081023 PRJNA980585_P_NODE_17836_length_337_cov_1.742424_g17582_i0 PRJNA980585 17836 337 1.742424 5.87196888 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 490 5.69e-134   NTclustered gi|673015481|ref|XM_008863480.1| 157072 g17582 i0 92.878 36.3086053412463 337 24 100 0 1 337 395 59 Aphanomyces invadans 60S ribosomal protein L44 mRNA blastn 12236 490 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
20081329 20081329 PRJNA980585_P_NODE_35716_length_264_cov_0.973822_g35462_i0 PRJNA980585 35716 264 0.973822 2.57089008 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 237 6.2e-58   NTclustered gi|813171767|ref|XM_012349249.1| 695850 g35462 i0 86.239 46.0643939393939 218 30 83 0 4 221 366 149 Saprolegnia parasitica CBS 223.65 histone H3 mRNA blastn 12161 237 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
21356452 21356452 PRJNA980585_P_NODE_15777_length_353_cov_1.378571_g15523_i0 PRJNA980585 15777 353 1.378571 4.86635563 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 366 1.0499999999999996e-96   NTclustered gi|673047300|ref|XM_008879389.1| 157072 g15523 i0 85.434 4.76770538243626 357 46 100 3 1 353 409 55 Aphanomyces invadans hypothetical protein mRNA blastn 1683 366 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
21357163 21357163 PRJNA980585_P_NODE_57517_length_243_cov_0.835294_g57263_i0 PRJNA980585 57517 243 0.835294 2.02976442 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 211 3.41e-50   NTclustered gi|2794925068|ref|XM_067882879.1| 164328 g57263 i0 82.845 92.9012345679012 239 37 98 4 7 243 591 355 Phytophthora ramorum 40S ribosomal protein S5-2 (KRP23_12280), partial mRNA blastn 22575 211 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
22631645 22631645 PRJNA980585_P_NODE_22778_length_307_cov_1.846154_g22524_i0 PRJNA980585 22778 307 1.846154 5.66769278 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 165 3.5300000000000004e-36   NTclustered gi|2795059836|ref|XM_067943054.1| 4785 g22524 i0 81.106 9.56677524429967 217 32 68 6 3 210 1242 1026 Phytophthora cinnamomi 4-hydroxyphenylpyruvate dioxygenase (IUM83_18075), partial mRNA blastn 2937 165 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
22631994 22631994 PRJNA980585_P_NODE_43418_length_250_cov_0.870056_g43164_i0 PRJNA980585 43418 250 0.870056 2.17514 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 148 2.8099999999999993e-31   NTclustered gi|2795032822|ref|XM_067928242.1| 4785 g43164 i0 88 22.696 125 15 50 0 1 125 254 130 Phytophthora cinnamomi serine/threonine-protein phosphatase PP2A (IUM83_04186), partial mRNA blastn 5674 148 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
23906961 23906961 PRJNA980585_P_NODE_14859_length_361_cov_1.336806_g14605_i0 PRJNA980585 14859 361 1.336806 4.82586966 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 523 6.029999999999998e-144   NTclustered gi|166039189|emb|CU355239.1| 100861 g14605 i0 92.798 32.3019390581717 361 26 100 0 1 361 642 282 Aphanomyces euteiches cDNA blastn 11661 523 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
25180475 25180475 PRJNA980585_P_NODE_10740_length_411_cov_1.313609_g10486_i0 PRJNA980585 10740 411 1.313609 5.39893299 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 333 1.26e-86   NTclustered gi|166044823|emb|CU351082.1| 100861 g10486 i0 84.257 47.6958637469586 343 52 83 2 13 354 491 150 Aphanomyces euteiches cDNA blastn 19603 333 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
25180868 25180868 PRJNA980585_P_NODE_33820_length_269_cov_1.341837_g33566_i0 PRJNA980585 33820 269 1.341837 3.60954153 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 412 9.81e-111   NTclustered gi|813199067|ref|XR_001099866.1| 695850 g33566 i0 94.444 71.457249070632 270 11 99 4 1 268 1391 1658 Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA blastn 19222 412 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
25180930 25180930 PRJNA980585_P_NODE_36820_length_261_cov_0.973404_g36566_i0 PRJNA980585 36820 261 0.973404 2.54058444 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 180 1.0499999999999999e-40   NTclustered gi|2795029237|ref|XM_067937609.1| 4785 g36566 i0 83.938 10.1111111111111 193 26 73 5 18 207 239 49 Phytophthora cinnamomi 40S ribosomal protein S14 (IUM83_12961), partial mRNA blastn 2639 180 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
25180954 25180954 PRJNA980585_P_NODE_38380_length_256_cov_1.683060_g38126_i0 PRJNA980585 38380 256 1.68306 4.3086336 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 124 4.859999999999999e-24   NTclustered gi|2795027182|ref|XM_067926253.1| 4785 g38126 i0 87.736 2.78515625 106 13 41 0 37 142 583 478 Phytophthora cinnamomi 40S ribosomal protein S8 (IUM83_02343), partial mRNA blastn 713 124 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;