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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
954351 954351 PRJNA980585_P_NODE_10501_length_414_cov_4.697947_g10247_i0 PRJNA980585 10501 414 4.697947 19.44950058 Gromochytrium mamkaevae 1486924 Fungi Fungi 154 1.06e-32   NTclustered gi|612507318|gb|KF586842.1| 1486924 g10247 i0 82.418 41.0821256038647 182 26 43 6 235 414 5975 5798 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17008 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
3505312 3505312 PRJNA980585_P_NODE_32963_length_271_cov_1.717172_g32709_i0 PRJNA980585 32963 271 1.717172 4.65353612 Polychytrium aggregatum 110093 Fungi Fungi 182 3.04e-41   NTclustered gi|2432146242|ref|XM_053110900.1| 110093 g32709 i0 80.242 10.2029520295203 248 43 90 4 12 256 315 71 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_503834), mRNA blastn 2765 182 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
4783065 4783065 PRJNA980585_P_NODE_39644_length_253_cov_1.283333_g39390_i0 PRJNA980585 39644 253 1.283333 3.24683249 Polychytrium aggregatum 110093 Fungi Fungi 154 6.12e-33   NTclustered gi|311235598|ref|NG_027613.1| 110093 g39390 i0 90.164 55.4189723320158 122 6 61 3 1 122 2480 2595 Polychytrium aggregatum JEL 109 28S rRNA gene, partial sequence; from reference material blastn 14021 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
4783457 4783457 PRJNA980585_P_NODE_8104_length_460_cov_3.563307_g7850_i0 PRJNA980585 8104 460 3.563307 16.3912122 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 7.21e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g7850 i0 82.313 4.23913043478261 147 26 32 0 286 432 229 83 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
6057834 6057834 PRJNA980585_P_NODE_20605_length_320_cov_1.246964_g20351_i0 PRJNA980585 20605 320 1.246964 3.9902848 Polychytrium aggregatum 110093 Fungi Fungi 215 3.62e-51   NTclustered gi|2432132805|ref|XM_053109589.1| 110093 g20351 i0 79.167 20.525 312 63 97 2 5 315 340 650 Polychytrium aggregatum 50S ribosomal protein L30e-like protein (BJ171DRAFT_490208), mRNA blastn 6568 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7333039 7333039 PRJNA980585_P_NODE_7366_length_479_cov_2.098522_g7112_i0 PRJNA980585 7366 479 2.098522 10.05192038 Polychytrium aggregatum 110093 Fungi Fungi 235 4.32e-57   NTclustered gi|2432149348|ref|XM_053111166.1| 110093 g7112 i0 79.876 18.7035490605428 323 63 67 2 1 322 519 198 Polychytrium aggregatum ribosomal protein S19-domain-containing protein (BJ171DRAFT_506928), mRNA blastn 8959 235 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9882602 9882602 PRJNA980585_P_NODE_18808_length_331_cov_1.193798_g18554_i0 PRJNA980585 18808 331 1.193798 3.95147138 Fimicolochytrium jonesii 1396493 Fungi Fungi 259 1.71e-64   NTclustered gi|2432072949|ref|XM_053073468.1| 1396493 g18554 i0 82.594 123.90332326284 293 51 89 0 9 301 247 539 Fimicolochytrium jonesii ubiquitin-related domain-containing protein (EV422DRAFT_586682), mRNA blastn 41012 259 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
11158118 11158118 PRJNA980585_P_NODE_29469_length_281_cov_1.341346_g29215_i0 PRJNA980585 29469 281 1.341346 3.76918226 Polychytrium aggregatum 110093 Fungi Fungi 145 4.15e-30   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g29215 i0 76.604 64.4448398576512 265 60 94 2 2 265 13 276 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 18109 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12433791 12433791 PRJNA980585_P_NODE_23810_length_302_cov_1.340611_g23556_i0 PRJNA980585 23810 302 1.340611 4.04864522 Batrachochytrium dendrobatidis 109871 Fungi Fungi 230 1.2099999999999995e-55   NTclustered gi|575480435|ref|XM_006679449.1| 684364 g23556 i0 82.222 46.9072847682119 270 45 89 3 27 295 6 273 Batrachochytrium dendrobatidis JAM81 peptidyl-prolyl cis-trans isomerase (BATDEDRAFT_30184), partial mRNA blastn 14166 230 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
16257509 16257509 PRJNA980585_P_NODE_24893_length_296_cov_1.946188_g24639_i0 PRJNA980585 24893 296 1.946188 5.76071648 Fimicolochytrium jonesii 1396493 Fungi Fungi 75 5.87e-9   NTclustered gi|2432062422|ref|XM_053069653.1| 1396493 g24639 i0 81.818 0.402027027027027 88 16 30 0 11 98 414 501 Fimicolochytrium jonesii cytochrome c-like domain-containing protein (EV422DRAFT_520015), mRNA blastn 119 75 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
22947136 22947136 PRJNA980585_P_NODE_61438_length_238_cov_2.800000_g61184_i0 PRJNA980585 61438 238 2.8 6.664 Fungi 4751 Fungi Fungi 86.1 2.11e-12   NTclustered gi|1866582795|gb|MT730970.1| 4814 g61184 i0 94.643 24.7058823529412 56 2 24 1 1 56 4495 4441 Chytriomyces hyalinus isolate PLAUS Ob-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5880 86.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;