RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6058152 6058152 PRJNA980585_P_NODE_38025_length_257_cov_1.673913_g37771_i0 PRJNA980585 38025 257 1.673913 4.30195641 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 350 7.400000000000001e-92   NTclustered gi|2874253811|emb|OY969795.1| 464461 g37771 i0 91.221 164.501945525292 262 15 100 7 1 257 2059636 2059378 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 42277 350 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
6373513 6373513 PRJNA980585_P_NODE_7225_length_484_cov_0.856448_g6971_i0 PRJNA980585 7225 484 0.856448 4.14520832 Candidatus Protochlamydia 282132 Bacteria Bacteria 701 0   NTclustered gi|1691252667|emb|BX908798.2| 264201 g6971 i0 92.653 121.256198347107 490 30 100 5 1 484 1250742 1250253 Candidatus Protochlamydia amoebophila UWE25 complete genome blastn 58688 701 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia amoebophila
16571847 16571847 PRJNA980585_P_NODE_28493_length_284_cov_1.094787_g28239_i0 PRJNA980585 28493 284 1.094787 3.10919508 Bacteria 2 Bacteria Bacteria 82.4 3.34e-11   NTclustered gi|2874253688|emb|OY969414.1| 174324 g28239 i0 94.34 1.48239436619718 53 3 19 0 1 53 2364382 2364434 MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 blastn 421 82.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;