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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA980585 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1269268 1269268 PRJNA980585_P_NODE_11701_length_396_cov_2.619195_g11447_i0 PRJNA980585 11701 396 2.619195 10.3720122 Fimbriimonas 1005038 Bacteria Bacteria 604 2.319999999999999e-168   NTclustered gi|663071213|gb|CP007139.1| 661478 g11447 i0 94.192 226.265151515152 396 23 100 0 1 396 28897 28502 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 89601 604 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
7332381 7332381 PRJNA980585_P_NODE_24866_length_296_cov_2.753363_g24612_i0 PRJNA980585 24866 296 2.753363 8.14995448 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 298 3.2e-76   NTclustered gi|2874253701|emb|OY969427.1| 157466 g24612 i0 86.842 547.466216216216 266 35 90 0 1 266 3407185 3407450 MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 blastn 162050 298 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
7647403 7647403 PRJNA980585_P_NODE_35946_length_263_cov_1.457895_g35692_i0 PRJNA980585 35946 263 1.457895 3.83426385 Capsulimonas 2494209 Bacteria Bacteria 252 2.21e-62   NTclustered gi|2621703062|emb|OY760504.1| 2033014 g35692 i0 87.054 496.897338403042 224 28 85 1 39 261 2410171 2409948 MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 blastn 130684 252 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
8922275 8922275 PRJNA980585_P_NODE_37467_length_259_cov_1.241935_g37213_i0 PRJNA980585 37467 259 1.241935 3.21661165 Fimbriimonas 1005038 Bacteria Bacteria 340 4.5e-89   NTclustered gi|663071213|gb|CP007139.1| 661478 g37213 i0 90.347 31.6486486486486 259 25 100 0 1 259 28916 29174 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 8197 340 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
12433607 12433607 PRJNA980585_P_NODE_14290_length_366_cov_2.631399_g14036_i0 PRJNA980585 14290 366 2.631399 9.63092034 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 202 3.259999999999999e-47   NTclustered gi|2874254000|emb|OY970325.1| 157466 g14036 i0 91.333 240.901639344262 150 9 40 3 41 188 1305218 1305365 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 88170 202 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
13708845 13708845 PRJNA980585_P_NODE_61791_length_232_cov_2.421384_g61537_i0 PRJNA980585 61791 232 2.421384 5.61761088 uncultured Fimbriimonas sp. 1936177 Bacteria Bacteria 429 8.2e-116   NTclustered gi|2363421043|gb|OP915165.1| 1936177 g61537 i0 100 99.5775862068966 232 0 100 0 1 232 354 123 Uncultured Fimbriimonas sp. clone 1104864 16S ribosomal RNA gene, partial sequence blastn 23102 429 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas uncultured Fimbriimonas sp.
17846935 17846935 PRJNA980585_P_NODE_33574_length_270_cov_1.040609_g33320_i0 PRJNA980585 33574 270 1.040609 2.8096443 Bacteria 2 Bacteria Bacteria 147 1.1000000000000001e-30   NTclustered gi|2874254000|emb|OY970325.1| 157466 g33320 i0 86.232 203.17037037037 138 15 50 4 93 228 1306859 1306724 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 54856 148 0.993243243243243 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
20395750 20395750 PRJNA980585_P_NODE_34676_length_267_cov_1.015464_g34422_i0 PRJNA980585 34676 267 1.015464 2.71128888 Fimbriimonas 1005038 Bacteria Bacteria 355 1.66e-93   NTclustered gi|663071213|gb|CP007139.1| 661478 g34422 i0 90.672 178.52808988764 268 23 99 2 1 266 29757 29490 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 47667 355 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
23907196 23907196 PRJNA980585_P_NODE_28439_length_284_cov_1.236967_g28185_i0 PRJNA980585 28439 284 1.236967 3.51298628 Capsulimonas corticalis 2219043 Bacteria Bacteria 206 1.8999999999999997e-48   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g28185 i0 81.89 152.577464788732 254 36 88 9 1 250 594377 594130 Capsulimonas corticalis AX-7 DNA, complete genome blastn 43332 206 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
24221055 24221055 PRJNA980585_P_NODE_46379_length_248_cov_0.880000_g46125_i0 PRJNA980585 46379 248 0.88 2.1824 PVC group 1783257 Bacteria Bacteria 78.7 3.7e-10   NTclustered gi|2314718026|dbj|AP024674.1| 2033014 g46125 i0 94.118 3.57258064516129 51 3 21 0 181 231 1419458 1419508 MAG: Armatimonadetes bacterium KatS3mg024 DNA, complete genome blastn 886 78.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;