RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA980585" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA980585 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3505532 3505532 PRJNA980585_P_NODE_45463_length_249_cov_0.875000_g45209_i0 PRJNA980585 45463 249 0.875 2.17875 Helobdella robusta 6412 Annelida Annelida 52.8 0.023   NTclustered gi|675888269|ref|XM_009031389.1| 6412 g45209 i0 100 0.112449799196787 28 0 11 0 26 53 1533 1506 Helobdella robusta hypothetical protein mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
4782959 4782959 PRJNA980585_P_NODE_32784_length_272_cov_1.276382_g32530_i0 PRJNA980585 32784 272 1.276382 3.47175904 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.025   NTclustered gi|2920003371|emb|OZ238862.1| 1046305 g32530 i0 100 0.102941176470588 28 0 10 0 158 185 25545718 25545691 Ailoscolex lacteospumosus genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
12433797 12433797 PRJNA980585_P_NODE_24110_length_300_cov_2.013216_g23856_i0 PRJNA980585 24110 300 2.013216 6.039648 Hirudo verbana 311461 Annelida Annelida 63.9 1.29e-5   NTclustered gi|2918369702|emb|OZ237787.1| 311461 g23856 i0 97.297 0.68 37 1 12 0 20 56 4851973 4851937 Hirudo verbana genome assembly, chromosome: 9 blastn 204 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
12434097 12434097 PRJNA980585_P_NODE_39850_length_252_cov_1.703911_g39596_i0 PRJNA980585 39850 252 1.703911 4.29385572 Helobdella robusta 6412 Annelida Annelida 54.7 0.006   NTclustered gi|675886967|ref|XM_009030738.1| 6412 g39596 i0 86.275 0.611111111111111 51 5 20 2 203 252 84 133 Helobdella robusta hypothetical protein partial mRNA blastn 154 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
13708455 13708455 PRJNA980585_P_NODE_36931_length_260_cov_1.647059_g36677_i0 PRJNA980585 36931 260 1.647059 4.2823534 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.024   NTclustered gi|2920003371|emb|OZ238862.1| 1046305 g36677 i0 100 0.107692307692308 28 0 11 0 7 34 264403 264430 Ailoscolex lacteospumosus genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
14982460 14982460 PRJNA980585_P_NODE_22152_length_311_cov_1.289916_g21898_i0 PRJNA980585 22152 311 1.289916 4.01163876 Aeolosoma sp. GG-2011 1071604 Annelida Annelida 215 3.5e-51   NTclustered gi|342220097|gb|HQ691208.1| 1071604 g21898 i0 80.769 8.57556270096463 286 46 90 7 6 286 191 472 Aeolosoma sp. GG-2011 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 2667 215 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Aeolosomatidae Aeolosoma Aeolosoma sp. GG-2011
14982993 14982993 PRJNA980585_P_NODE_55332_length_244_cov_0.900585_g55078_i0 PRJNA980585 55332 244 0.900585 2.1974274 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.006   NTclustered gi|2920003636|emb|OZ238874.1| 1046305 g55078 i0 100 0.118852459016393 29 0 12 0 210 238 17897855 17897883 Ailoscolex lacteospumosus genome assembly, chromosome: 15 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
16257806 16257806 PRJNA980585_P_NODE_43333_length_250_cov_0.870056_g43079_i0 PRJNA980585 43333 250 0.870056 2.17514 Hirudo verbana 311461 Annelida Annelida 54.7 0.006   NTclustered gi|2918369697|emb|OZ237786.1| 311461 g43079 i0 96.875 0.128 32 1 13 0 130 161 1519981 1519950 Hirudo verbana genome assembly, chromosome: 8 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
17532450 17532450 PRJNA980585_P_NODE_17134_length_342_cov_1.717472_g16880_i0 PRJNA980585 17134 342 1.717472 5.87375424 Helobdella robusta 6412 Annelida Annelida 65.8 4.15e-6   NTclustered gi|675890727|ref|XM_009032618.1| 6412 g16880 i0 95.122 3.7953216374269 41 2 12 0 287 327 4168 4128 Helobdella robusta hypothetical protein partial mRNA blastn 1298 65.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
17532530 17532530 PRJNA980585_P_NODE_2114_length_818_cov_2.183893_g1886_i0 PRJNA980585 2114 818 2.183893 17.86424474 Helobdella robusta 6412 Annelida Annelida 228 1.2699999999999999e-54   NTclustered gi|675860785|ref|XM_009017705.1| 6412 g1886 i0 73.977 17.3777506112469 611 138 74 17 1 602 995 397 Helobdella robusta hypothetical protein mRNA blastn 14215 228 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
20081453 20081453 PRJNA980585_P_NODE_42536_length_250_cov_0.870056_g42282_i0 PRJNA980585 42536 250 0.870056 2.17514 Hirudo verbana 311461 Annelida Annelida 62.1 3.76e-5   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g42282 i0 97.222 7.48 36 1 14 0 187 222 15149045 15149080 Hirudo verbana genome assembly, chromosome: 4 blastn 1870 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
24221108 24221108 PRJNA980585_P_NODE_61859_length_231_cov_2.158228_g61605_i0 PRJNA980585 61859 231 2.158228 4.98550668 root 1 Root_unresolved Root_unresolved 52.8 0.021   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g61605 i0 94.286 1.16017316017316 35 1 15 1 103 137 8763436 8763403 Hirudo verbana genome assembly, chromosome: 12 blastn 268 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;