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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA977246" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA977246 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9879507 9879507 PRJNA977246_S_NODE_34208_length_205_cov_2.289773_g33216_i0 PRJNA977246 34208 205 2.289773 4.69403465 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 185 1.69e-42   NTclustered gi|2874253698|emb|OY969424.1| 1672391 g33216 i0 83.673 1.36585365853659 196 32 96 0 1 196 431349 431154 MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 blastn 280 185 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
11472659 11472659 PRJNA977246_S_NODE_2609_length_1082_cov_8.146249_g2231_i0 PRJNA977246 2609 1082 8.146249 88.14241418 Bacillati 1783272 Bacteria Bacteria 409 5.67e-109   NTclustered gi|470481958|ref|NR_076505.1| 357808 g2231 i0 74.333 335.125693160813 1087 221 98 53 21 1082 8 1061 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 362606 412 0.992718446601942 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
13704767 13704767 PRJNA977246_S_NODE_24271_length_268_cov_4.200837_g23279_i0 PRJNA977246 24271 268 4.200837 11.25824316 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 122 1.8399999999999998e-23   NTclustered gi|2893358443|emb|OZ220735.1| 3069543 g23279 i0 87.619 44.7350746268657 105 13 39 0 1 105 2878307 2878411 MAG: Phototrophicaceae bacterium isolate 252cb3c6-93c9-4785-98a9-44529c25b936 genome assembly, chromosome: 1 blastn 11989 122 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
13705137 13705137 PRJNA977246_S_NODE_40011_length_181_cov_5.019737_g39019_i0 PRJNA977246 40011 181 5.019737 9.08572397 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 191 3.12e-44   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g39019 i0 90.345 5.56353591160221 145 14 80 0 1 145 1959140 1959284 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 1007 191 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
18803350 18803350 PRJNA977246_S_NODE_45175_length_165_cov_20.036765_g44183_i0 PRJNA977246 45175 165 20.036765 33.06066225 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 279 5.81e-71   NTclustered gi|371779831|emb|HE614790.1| 166587 g44183 i0 98.125 92.9090909090909 160 3 97 0 1 160 160 1 Uncultured Chloroflexi bacterium partial 16S rRNA gene, clone H06L-1 blastn 15330 279 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
22628000 22628000 PRJNA977246_S_NODE_16578_length_352_cov_3.557276_g15587_i0 PRJNA977246 16578 352 3.557276 12.52161152 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 429 1.32e-115   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g15587 i0 88.636 6.40909090909091 352 40 100 0 1 352 1959167 1958816 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 2256 429 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;