contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA977246" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 950973 | 950973 | PRJNA977246_S_NODE_19181_length_319_cov_2.993103_g18189_i0 | PRJNA977246 | 19181 | 319 | 2.993103 | 9.54799857 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 311 | 4.47e-80 | NTclustered | gi|2556886971|gb|CP129473.1| | 2053589 | g18189 | i0 | 84.858 | 114.984326018809 | 317 | 39 | 97 | 8 | 3 | 313 | 443662 | 443975 | MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome | blastn | 36680 | 311 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 951797 | 951797 | PRJNA977246_S_NODE_8381_length_538_cov_8.754420_g7522_i0 | PRJNA977246 | 8381 | 538 | 8.75442 | 47.0987796 | uncultured candidate division SR1 bacterium | 221237 | Bacteria | Bacteria | 580 | 5.4499999999999985e-161 | NTclustered | gi|336020567|gb|JF917288.1| | 221237 | g7522 | i0 | 88.32 | 94.1486988847584 | 488 | 52 | 90 | 5 | 53 | 538 | 115 | 599 | Uncultured candidate division SR1 bacterium clone B1Q1E-91f-JRD28 16S ribosomal RNA gene, partial sequence | blastn | 50652 | 580 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | uncultured candidate division SR1 bacterium | ||||||
| 4779413 | 4779413 | PRJNA977246_S_NODE_26664_length_249_cov_3.595455_g25672_i0 | PRJNA977246 | 26664 | 249 | 3.595455 | 8.95268295 | candidate division TM6 bacterium GW2011_GWF2_28_16 | 1619077 | Bacteria | Bacteria | 261 | 3.44e-65 | NTclustered | gi|837367205|gb|CP011212.1| | 1619077 | g25672 | i0 | 86.475 | 64.5502008032128 | 244 | 26 | 95 | 5 | 1 | 237 | 133935 | 134178 | Candidate division TM6 bacterium GW2011_GWF2_28_16 chromosome, complete genome | blastn | 16073 | 261 | 1 | Bacteria | Bacteria candidate phyla | candidate division TM6 bacterium GW2011_GWF2_28_16 | |||||||
| 6054972 | 6054972 | PRJNA977246_S_NODE_4605_length_763_cov_11.337875_g4013_i0 | PRJNA977246 | 4605 | 763 | 11.337875 | 86.50798625 | candidate division SR1 bacterium RAAC1_SR1_1 | 1394709 | Bacteria | Bacteria | 804 | 0 | NTclustered | gi|563351663|gb|CP006913.1| | 1394709 | g4013 | i0 | 86.28 | 88.0943643512451 | 758 | 83 | 98 | 20 | 1 | 746 | 128834 | 129582 | Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome | blastn | 67216 | 804 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium RAAC1_SR1_1 | ||||||
| 9879216 | 9879216 | PRJNA977246_S_NODE_23248_length_277_cov_11.588710_g22256_i0 | PRJNA977246 | 23248 | 277 | 11.58871 | 32.1007267 | Candidatus Mycosynbacter amalyticus | 2665156 | Bacteria | Bacteria | 379 | 1.03e-100 | NTclustered | gi|1799615131|gb|CP045921.1| | 2665156 | g22256 | i0 | 91.697 | 74 | 277 | 18 | 99 | 3 | 5 | 277 | 217527 | 217252 | Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome | blastn | 20498 | 379 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Mycosynbacter | Candidatus Mycosynbacter amalyticus | |||||
| 12430701 | 12430701 | PRJNA977246_S_NODE_35010_length_201_cov_3.796512_g34018_i0 | PRJNA977246 | 35010 | 201 | 3.796512 | 7.63098912 | candidate division TM6 bacterium GW2011_GWF2_28_16 | 1619077 | Bacteria | Bacteria | 159 | 1e-34 | NTclustered | gi|837367205|gb|CP011212.1| | 1619077 | g34018 | i0 | 93.458 | 1.11442786069652 | 107 | 7 | 53 | 0 | 95 | 201 | 134302 | 134408 | Candidate division TM6 bacterium GW2011_GWF2_28_16 chromosome, complete genome | blastn | 224 | 159 | 1 | Bacteria | Bacteria candidate phyla | candidate division TM6 bacterium GW2011_GWF2_28_16 | |||||||
| 21352998 | 21352998 | PRJNA977246_S_NODE_16717_length_350_cov_3.716511_g15725_i0 | PRJNA977246 | 16717 | 350 | 3.716511 | 13.0077885 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 213 | 1.43e-50 | NTclustered | gi|2258832001|gb|CP060225.1| | 2053688 | g15725 | i0 | 78.235 | 15.4257142857143 | 340 | 68 | 96 | 6 | 12 | 348 | 625929 | 626265 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome | blastn | 5399 | 213 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 23904164 | 23904164 | PRJNA977246_S_NODE_4599_length_764_cov_4.605442_g4007_i0 | PRJNA977246 | 4599 | 764 | 4.605442 | 35.18557688 | Candidatus Campbellbacteria bacterium | 2026716 | Bacteria | Bacteria | 396 | 3.069999999999999e-105 | NTclustered | gi|1958034697|gb|CP064977.1| | 2026716 | g4007 | i0 | 78.493 | 33.8390052356021 | 637 | 113 | 82 | 24 | 1 | 624 | 449869 | 449244 | MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome | blastn | 25853 | 396 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Campbelliibacteriota | Candidatus Campbellbacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;