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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 12 ✖

bioproject 1

  • PRJNA976345 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2223118 2223118 PRJNA976345_P_NODE_124802_length_178_cov_1.559441_g123194_i0 PRJNA976345 124802 178 1.559441 2.77580498 Candidatus Nitrosocosmicus franklandianus 1798806 Archaea Archaea 56.5 0.001   NTclustered gi|1599533355|emb|LR216287.1| 1798806 g123194 i0 100 0.168539325842697 30 0 17 0 85 114 1183389 1183360 Candidatus Nitrosocosmicus franklandus isolate NFRAN1 genome assembly, chromosome: NFRAN blastn 30 56.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus franklandianus
2224019 2224019 PRJNA976345_P_NODE_61802_length_227_cov_1.739583_g60194_i0 PRJNA976345 61802 227 1.739583 3.94885341 Methanolobus sp. ZRKC2 3125783 Archaea Archaea 52.8 0.02   NTclustered gi|2708450131|gb|CP146980.1| 3125783 g60194 i0 100 0.123348017621145 28 0 12 0 8 35 205498 205525 Methanolobus sp. ZRKC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp. ZRKC2
8601598 8601598 PRJNA976345_P_NODE_59347_length_230_cov_3.482051_g57739_i0 PRJNA976345 59347 230 3.482051 8.0087173 Candidatus Methanospirare jalkutatii 2977098 Archaea Archaea 52.8 0.021   NTclustered gi|2324523409|gb|CP110382.1| 2977098 g57739 i0 100 0.243478260869565 28 0 12 0 16 43 296054 296081 MAG: Candidatus Methanospirare jalkutatii isolate FWG175 chromosome blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanospirareceae Candidatus Methanospirare Candidatus Methanospirare jalkutatii
12427119 12427119 PRJNA976345_P_NODE_149230_length_166_cov_4.015267_g147622_i0 PRJNA976345 149230 166 4.015267 6.66534322 uncultured Candidatus Nitrosopumilus sp. 517606 Archaea Archaea 52.8 0.014   NTclustered gi|2518550870|emb|OX638319.1| 517606 g147622 i0 100 0.168674698795181 28 0 17 0 71 98 249961 249988 MAG: uncultured Candidatus Nitrosopumilus sp. isolate a9bb1b8d-3405-4f78-8bb0-675615731146 genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus uncultured Candidatus Nitrosopumilus sp.
14975729 14975729 PRJNA976345_P_NODE_138692_length_171_cov_2.080882_g137084_i0 PRJNA976345 138692 171 2.080882 3.55830822 uncultured Methanobacterium sp. 176306 Archaea Archaea 54.7 0.004   NTclustered gi|2621703503|emb|OY762552.1| 176306 g137084 i0 96.97 0.192982456140351 33 0 19 1 21 53 1272314 1272283 MAG: uncultured Methanobacterium sp. isolate 3f2017ab-9e69-417f-80a5-32741c1572f8 genome assembly, chromosome: 1 blastn 33 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
15294887 15294887 PRJNA976345_P_NODE_119612_length_178_cov_2.895105_g118004_i0 PRJNA976345 119612 178 2.895105 5.1532869 root 1 Root_unresolved Root_unresolved 52.8 0.015   NTclustered gi|2105355784|gb|CP084090.1| 1586233 g118004 i0 100 0.353932584269663 28 0 16 0 22 49 706159 706186 Halomicrobium urmianum strain IBRC-M: 10911 chromosome, complete genome blastn 63 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium urmianum
16251043 16251043 PRJNA976345_P_NODE_191793_length_152_cov_1.547009_g190185_i0 PRJNA976345 191793 152 1.547009 2.35145368 Candidatus Heimdallarchaeum endolithica 2876572 Archaea Archaea 60.2 7.43e-5   NTclustered gi|2180470024|gb|CP084167.1| 2876572 g190185 i0 97.143 0.230263157894737 35 1 23 0 13 47 1699136 1699170 MAG: Candidatus Heimdallarchaeum endolithica isolate PR6 chromosome, complete genome blastn 35 60.2 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum endolithica
22624851 22624851 PRJNA976345_P_NODE_131238_length_175_cov_1.307143_g129630_i0 PRJNA976345 131238 175 1.307143 2.28750025 Methanochimaera problematica 2609417 Archaea Archaea 52.8 0.015   NTclustered gi|2594454307|gb|CP043875.1| 2609417 g129630 i0 100 0.16 28 0 16 0 119 146 491879 491906 Methanochimaera problematica strain FWC-SCC4 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanochimaera Methanochimaera problematica
22625006 22625006 PRJNA976345_P_NODE_157098_length_163_cov_2.476562_g155490_i0 PRJNA976345 157098 163 2.476562 4.03679606 Candidatus Nanopusillus acidilobi 1577684 Archaea Archaea 52.8 0.014   NTclustered gi|985630447|gb|CP010514.1| 1577684 g155490 i0 100 0.171779141104294 28 0 17 0 71 98 265534 265561 Candidatus Nanopusillus acidilobi strain 7A chromosome, complete genome blastn 28 52.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanopusillaceae Candidatus Nanopusillus Candidatus Nanopusillus acidilobi
23901457 23901457 PRJNA976345_P_NODE_84219_length_202_cov_1.670659_g82611_i0 PRJNA976345 84219 202 1.670659 3.37473118 Natrarchaeobaculum aegyptiacum 745377 Archaea Archaea 62.1 2.92e-5   NTclustered gi|1196598842|gb|CP019893.1| 745377 g82611 i0 92.857 0.207920792079208 42 3 21 0 67 108 2705856 2705815 Natrarchaeobaculum aegyptiacum strain JW/NM-HA 15 chromosome, complete genome blastn 42 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrarchaeobaculum aegyptiacum
25174290 25174290 PRJNA976345_P_NODE_21620_length_362_cov_2.941896_g20020_i0 PRJNA976345 21620 362 2.941896 10.64966352 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 58.4 7.38e-4   NTclustered gi|2874253858|emb|OY969914.1| 176233 g20020 i0 97.059 0.0939226519337017 34 1 9 0 252 285 2212723 2212690 MAG: uncultured Methanobacteriaceae archaeon isolate MFD02416.bin.1.248 genome assembly, chromosome: 1 blastn 34 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
25174378 25174378 PRJNA976345_P_NODE_28300_length_317_cov_1.833333_g26696_i0 PRJNA976345 28300 317 1.833333 5.81166561 uncultured archaeon 115547 Archaea Archaea 52.8 0.03   NTclustered gi|765560072|gb|KP308683.1| 115547 g26696 i0 100 0.0883280757097792 28 0 9 0 28 55 1361 1334 Uncultured archaeon clone RBG_16_scaffold_12837 genomic sequence blastn 28 52.8 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;