contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 947742 | 947742 | PRJNA976345_P_NODE_121341_length_178_cov_2.412587_g119733_i0 | PRJNA976345 | 121341 | 178 | 2.412587 | 4.29440486 | Treponema denticola | 158 | Bacteria | Bacteria | 139 | 1.1199999999999999e-28 | NTclustered | gi|2265166044|gb|CP051303.1| | 158 | g119733 | i0 | 100 | 9.17977528089888 | 75 | 0 | 84 | 0 | 1 | 75 | 1536483 | 1536557 | Treponema denticola strain OT2B chromosome, complete genome | blastn | 1634 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 4776923 | 4776923 | PRJNA976345_P_NODE_59544_length_230_cov_2.194872_g57936_i0 | PRJNA976345 | 59544 | 230 | 2.194872 | 5.0482056 | Treponema sp. OMZ 788 | 2563664 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2265141765|gb|CP051199.1| | 2563664 | g57936 | i0 | 100 | 0.121739130434783 | 28 | 0 | 12 | 0 | 62 | 89 | 2515017 | 2515044 | Treponema sp. OMZ 788 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 788 | ||
| 7645245 | 7645245 | PRJNA976345_P_NODE_199466_length_150_cov_1.373913_g197858_i0 | PRJNA976345 | 199466 | 150 | 1.373913 | 2.0608695 | Borrelia | 138 | Bacteria | Bacteria | 54.7 | 0.003 | NTclustered | gi|576104362|gb|CP004146.1| | 1293576 | g197858 | i0 | 100 | 0.766666666666667 | 29 | 0 | 19 | 0 | 71 | 99 | 390147 | 390119 | Borrelia hermsii YOR, complete genome | blastn | 115 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borrelia | Borrelia nietonii | ||
| 8919852 | 8919852 | PRJNA976345_P_NODE_134967_length_173_cov_1.630435_g133359_i0 | PRJNA976345 | 134967 | 173 | 1.630435 | 2.82065255 | Brachyspira | 29521 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2021755399|gb|CP046930.1| | 159 | g133359 | i0 | 96.97 | 2.28901734104046 | 33 | 0 | 18 | 1 | 1 | 32 | 546839 | 546871 | Brachyspira hyodysenteriae strain BHZ375 chromosome, complete genome | blastn | 396 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 9875928 | 9875928 | PRJNA976345_P_NODE_130208_length_175_cov_2.185714_g128600_i0 | PRJNA976345 | 130208 | 175 | 2.185714 | 3.8249995 | Brachyspira intermedia | 84377 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|343385146|gb|CP002874.1| | 1045858 | g128600 | i0 | 100 | 0.16 | 28 | 0 | 16 | 0 | 34 | 61 | 602231 | 602204 | Brachyspira intermedia PWS/A, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira intermedia | ||
| 10195760 | 10195760 | PRJNA976345_P_NODE_169268_length_159_cov_1.604839_g167660_i0 | PRJNA976345 | 169268 | 159 | 1.604839 | 2.55169401 | Borreliella | 64895 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2592014987|gb|CP118292.1| | 29519 | g167660 | i0 | 96.774 | 1.34591194968553 | 31 | 1 | 19 | 0 | 28 | 58 | 11438 | 11468 | Borreliella garinii strain 17-56Z1 plasmid lp17 | blastn | 214 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 10196133 | 10196133 | PRJNA976345_P_NODE_79368_length_206_cov_2.707602_g77760_i0 | PRJNA976345 | 79368 | 206 | 2.707602 | 5.57766012 | Treponema | 157 | Bacteria | Bacteria | 243 | 9.96e-60 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g77760 | i0 | 87.864 | 12.6067961165049 | 206 | 25 | 100 | 0 | 1 | 206 | 1684343 | 1684548 | Treponema sp. OMZ 838, complete genome | blastn | 2597 | 243 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 15295078 | 15295078 | PRJNA976345_P_NODE_178772_length_156_cov_1.322314_g177164_i0 | PRJNA976345 | 178772 | 156 | 1.322314 | 2.06280984 | Treponema | 157 | Bacteria | Bacteria | 172 | 9.45e-39 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g177164 | i0 | 86.538 | 4.94230769230769 | 156 | 21 | 100 | 0 | 1 | 156 | 1798600 | 1798445 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 771 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 16251509 | 16251509 | PRJNA976345_P_NODE_53953_length_240_cov_1.390244_g52345_i0 | PRJNA976345 | 53953 | 240 | 1.390244 | 3.3365856 | Treponema brennaborense | 81028 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|332179772|gb|CP002696.1| | 906968 | g52345 | i0 | 94.286 | 0.145833333333333 | 35 | 2 | 15 | 0 | 47 | 81 | 1851621 | 1851587 | Treponema brennaborense DSM 12168, complete genome | blastn | 35 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 18800615 | 18800615 | PRJNA976345_P_NODE_79015_length_207_cov_1.366279_g77407_i0 | PRJNA976345 | 79015 | 207 | 1.366279 | 2.82819753 | Treponema sp. OMZ 906 | 2563662 | Bacteria | Bacteria | 287 | 4.56e-73 | NTclustered | gi|2265130757|gb|CP051196.1| | 2563662 | g77407 | i0 | 93.717 | 7.38164251207729 | 191 | 12 | 92 | 0 | 2 | 192 | 2675193 | 2675383 | Treponema sp. OMZ 906 chromosome, complete genome | blastn | 1528 | 287 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 23901242 | 23901242 | PRJNA976345_P_NODE_6259_length_727_cov_8.170520_g4912_i0 | PRJNA976345 | 6259 | 727 | 8.17052 | 59.3996804 | Leptospira kirschneri | 29507 | Bacteria | Bacteria | 56.5 | 0.006 | NTclustered | gi|2355083728|gb|CP112976.1| | 29507 | g4912 | i0 | 100 | 0.163686382393398 | 30 | 0 | 4 | 0 | 558 | 587 | 3816786 | 3816815 | Leptospira kirschneri strain I-7 chromosome 1, complete sequence | blastn | 119 | 56.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira kirschneri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;