RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA976345 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4777015 4777015 PRJNA976345_P_NODE_68864_length_218_cov_1.300546_g67256_i0 PRJNA976345 68864 218 1.300546 2.83519028 Sobelivirales sp. 2809868 Viruses Viruses 252 1.77e-62   NTclustered gi|2647548694|gb|OR843429.1| 2809868 g67256 i0 87.671 2.00917431192661 219 24 99 2 1 216 5646 5428 Sobelivirales sp. strain MR644-18D/28050 polyprotein and hypothetical protein genes, complete cds blastn 438 252 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.
20074433 20074433 PRJNA976345_P_NODE_137276_length_172_cov_1.474453_g135668_i0 PRJNA976345 137276 172 1.474453 2.53605916 Sapovirus sp. 1906670 Viruses Viruses 165 1.78e-36   NTclustered gi|2196304084|gb|MZ679047.1| 1906670 g135668 i0 87.413 284.970930232558 143 18 83 0 28 170 1616 1474 MAG: Sapovirus sp. isolate R16-k141_22382 polyprotein gene, partial cds blastn 49015 165 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae Sapovirus Sapovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;