RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA976345 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4775975 4775975 PRJNA976345_P_NODE_113264_length_181_cov_2.821918_g111656_i0 PRJNA976345 113264 181 2.821918 5.10767158 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 63.9 7.1e-6   NTclustered gi|2733964865|ref|XM_065466801.1| 3053472 g111656 i0 87.5 0.30939226519337 56 5 31 2 78 133 1612 1559 PREDICTED: Gordionus sp. m RMFG-2023 sodium/potassium-transporting ATPase subunit alpha-B-like (LOC135930035), mRNA blastn 56 63.9 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
12427943 12427943 PRJNA976345_P_NODE_62790_length_225_cov_3.384211_g61182_i0 PRJNA976345 62790 225 3.384211 7.61447475 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.02   NTclustered gi|2733954242|ref|XM_065461589.1| 3053472 g61182 i0 100 0.622222222222222 28 0 12 0 77 104 480 453 PREDICTED: Gordionus sp. m RMFG-2023 mediator of RNA polymerase II transcription subunit 25-like (LOC135925975), transcript variant X1, mRNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
25174941 25174941 PRJNA976345_P_NODE_83760_length_202_cov_2.437126_g82152_i0 PRJNA976345 83760 202 2.437126 4.92299452 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 52.8 0.018   NTclustered gi|2733956183|ref|XR_010571924.1| 3053472 g82152 i0 100 0.277227722772277 28 0 14 0 140 167 1115 1088 PREDICTED: Gordionus sp. m RMFG-2023 ankyrin repeat and LEM domain-containing protein 1-like (LOC135926599), transcript variant X2, misc_RNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;