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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 12 ✖

bioproject 1

  • PRJNA976345 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
948791 948791 PRJNA976345_P_NODE_74901_length_211_cov_1.744318_g73293_i0 PRJNA976345 74901 211 1.744318 3.68051098 Betapapillomavirus 2 333924 Viruses Viruses 291 3.61e-74   NTclustered gi|1020178|gb|U31780.1|HPU31780 37954 g73293 i0 91.469 3.68720379146919 211 18 100 0 1 211 4837 5047 Human papillomavirus type 22, complete genome blastn 778 291 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
1267111 1267111 PRJNA976345_P_NODE_184761_length_154_cov_1.638655_g183153_i0 PRJNA976345 184761 154 1.638655 2.5235287 Betapapillomavirus 333922 Viruses Viruses 285 1.14e-72   NTclustered gi|1559669458|gb|MH777293.2| 10566 g183153 i0 100 3.19480519480519 154 0 100 0 1 154 2170 2017 MAG: Human papillomavirus isolate HPV-mSK_151, partial genome blastn 492 285 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
2543094 2543094 PRJNA976345_P_NODE_5942_length_750_cov_9.671329_g2245_i1 PRJNA976345 5942 750 9.671329 72.5349675 Anelloviridae 687329 Viruses Viruses 56.5 0.006   NTclustered gi|307341607|gb|HM633235.1| 687387 g2245 i1 100 0.602666666666667 30 0 4 0 278 307 2599 2628 Torque teno sus virus 2 isolate TTV2Ln13, complete genome blastn 452 56.5 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Iotatorquevirus Iotatorquevirus suida1a
4775924 4775924 PRJNA976345_P_NODE_105944_length_186_cov_1.370861_g104336_i0 PRJNA976345 105944 186 1.370861 2.54980146 Gammapapillomavirus 8 1175850 Viruses Viruses 339 1.0899999999999998e-88   NTclustered gi|343411609|gb|HM999999.1| 1070420 g104336 i0 99.462 1 186 1 100 0 1 186 7060 6875 Human papillomavirus type 147 isolate GH659, complete genome blastn 186 339 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 8
7325919 7325919 PRJNA976345_P_NODE_172206_length_158_cov_1.617886_g170598_i0 PRJNA976345 172206 158 1.617886 2.55625988 Human papillomavirus 10566 Viruses Viruses 292 7.07e-75   NTclustered gi|1480687842|gb|MH777175.1| 10566 g170598 i0 100 2 158 0 100 0 1 158 3090 2933 MAG: Human papillomavirus isolate HPV-mSK_027, complete genome blastn 316 292 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
7645335 7645335 PRJNA976345_P_NODE_3246_length_1166_cov_9.759505_g2245_i0 PRJNA976345 3246 1166 9.759505 113.7958283 Anelloviridae 687329 Viruses Viruses 56.5 0.009   NTclustered gi|307341607|gb|HM633235.1| 687387 g2245 i0 100 0.387650085763293 30 0 3 0 860 889 2628 2599 Torque teno sus virus 2 isolate TTV2Ln13, complete genome blastn 452 56.5 1 Viruses   Shotokuvirae Commensaviricota Cardeaviricetes Sanitavirales Anelloviridae Iotatorquevirus Iotatorquevirus suida1a
9876667 9876667 PRJNA976345_P_NODE_43208_length_263_cov_1.907895_g41600_i0 PRJNA976345 43208 263 1.907895 5.01776385 Betapapillomavirus 1 337051 Viruses Viruses 440 4.389999999999998e-119   NTclustered gi|1273499010|gb|MF588679.1| 337051 g41600 i0 100 2.7148288973384 238 0 90 0 26 263 144 381 Betapapillomavirus 1 isolate Beta01_w15c111, complete genome blastn 714 440 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
11470829 11470829 PRJNA976345_P_NODE_139829_length_171_cov_1.176471_g138221_i0 PRJNA976345 139829 171 1.176471 2.01176541 Betapapillomavirus 333922 Viruses Viruses 311 2.14e-80   NTclustered gi|1559669458|gb|MH777293.2| 10566 g138221 i0 99.415 14.6315789473684 171 1 100 0 1 171 2366 2536 MAG: Human papillomavirus isolate HPV-mSK_151, partial genome blastn 2502 311 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
17844986 17844986 PRJNA976345_P_NODE_67154_length_220_cov_1.497297_g65546_i0 PRJNA976345 67154 220 1.497297 3.2940534 Betapapillomavirus 333922 Viruses Viruses 407 3.61e-109   NTclustered gi|1559669458|gb|MH777293.2| 10566 g65546 i0 100 3.99545454545455 220 0 100 0 1 220 4667 4448 MAG: Human papillomavirus isolate HPV-mSK_151, partial genome blastn 879 407 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
20393373 20393373 PRJNA976345_P_NODE_153336_length_165_cov_1.400000_g151728_i0 PRJNA976345 153336 165 1.4 2.31 Betapapillomavirus 333922 Viruses Viruses 305 9.59e-79   NTclustered gi|1273499010|gb|MF588679.1| 337051 g151728 i0 100 3 165 0 100 0 1 165 4739 4903 Betapapillomavirus 1 isolate Beta01_w15c111, complete genome blastn 495 305 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
25174101 25174101 PRJNA976345_P_NODE_16700_length_414_cov_2.058047_g15111_i0 PRJNA976345 16700 414 2.058047 8.52031458 Betapapillomavirus 2 333924 Viruses Viruses 671 0   NTclustered gi|1020178|gb|U31780.1|HPU31780 37954 g15111 i0 95.894 2.94444444444444 414 17 100 0 1 414 2091 1678 Human papillomavirus type 22, complete genome blastn 1219 671 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
25493798 25493798 PRJNA976345_P_NODE_33720_length_293_cov_1.631783_g32113_i0 PRJNA976345 33720 293 1.631783 4.78112419 Betapapillomavirus 333922 Viruses Viruses 542 1.32e-149   NTclustered gi|1559669458|gb|MH777293.2| 10566 g32113 i0 100 16.3720136518771 293 0 100 0 1 293 7096 6804 MAG: Human papillomavirus isolate HPV-mSK_151, partial genome blastn 4797 542 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;