contig_metadata
56 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_kingdom = "Orthornavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 948000 | 948000 | PRJNA976345_P_NODE_16061_length_423_cov_1.510309_g14474_i0 | PRJNA976345 | 16061 | 423 | 1.510309 | 6.38860707 | Pestivirus bovis | 3052619 | Viruses | Viruses | 699 | 0 | NTclustered | gi|14209816|gb|AF255049.1|AF255049 | 158477 | g14474 | i0 | 96.454 | 99.7517730496454 | 423 | 15 | 100 | 0 | 1 | 423 | 859 | 437 | Bovine viral diarrhea virus strain Braidwood polyprotein gene, partial cds | blastn | 42195 | 699 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 948344 | 948344 | PRJNA976345_P_NODE_2961_length_1259_cov_5.395425_g1987_i1 | PRJNA976345 | 2961 | 1259 | 5.395425 | 67.92840075 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 2204 | 0 | NTclustered | gi|2813517649|gb|PQ362002.1| | 381707 | g1987 | i1 | 98.253 | 32.9849086576648 | 1259 | 22 | 100 | 0 | 1 | 1259 | 8756 | 7498 | Bovine viral diarrhea virus 3 isolate HN2009, partial genome | blastn | 41528 | 2204 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 948734 | 948734 | PRJNA976345_P_NODE_68141_length_218_cov_3.918033_g66533_i0 | PRJNA976345 | 68141 | 218 | 3.918033 | 8.54131194 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 366 | 6.06e-97 | NTclustered | gi|2813517655|gb|PQ362005.1| | 381707 | g66533 | i0 | 97.222 | 28.2247706422018 | 216 | 6 | 99 | 0 | 3 | 218 | 4821 | 5036 | Bovine viral diarrhea virus 3 isolate HN2247, partial genome | blastn | 6153 | 366 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 3498203 | 3498203 | PRJNA976345_P_NODE_100143_length_190_cov_1.064516_g98535_i0 | PRJNA976345 | 100143 | 190 | 1.064516 | 2.0225804 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 340 | 3.1099999999999993e-89 | NTclustered | gi|2813517655|gb|PQ362005.1| | 381707 | g98535 | i0 | 98.947 | 27.9894736842105 | 190 | 2 | 100 | 0 | 1 | 190 | 4372 | 4561 | Bovine viral diarrhea virus 3 isolate HN2247, partial genome | blastn | 5318 | 340 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 3498620 | 3498620 | PRJNA976345_P_NODE_16223_length_420_cov_4.685714_g14636_i0 | PRJNA976345 | 16223 | 420 | 4.685714 | 19.6799988 | Pestivirus bovis | 3052619 | Viruses | Viruses | 612 | 1.4799999999999999e-170 | NTclustered | gi|2997669|gb|AF052304.1| | 11099 | g14636 | i0 | 93.253 | 95.7238095238095 | 415 | 28 | 99 | 0 | 6 | 420 | 2176 | 1762 | Pestivirus type 1 strain Trangie polyprotein gene, partial cds | blastn | 40204 | 612 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4776074 | 4776074 | PRJNA976345_P_NODE_129984_length_175_cov_2.507143_g128376_i0 | PRJNA976345 | 129984 | 175 | 2.507143 | 4.38750025 | Bromovirus BMV | 3427622 | Viruses | Viruses | 318 | 1.32e-82 | NTclustered | gi|2239526092|gb|MW568015.1| | 12302 | g128376 | i0 | 99.429 | 42 | 175 | 1 | 100 | 0 | 1 | 175 | 867 | 693 | Brome mosaic virus isolate BMV-B movement protein and coat protein (CP) genes, complete cds | blastn | 7350 | 318 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Bromoviridae | Bromovirus | Bromovirus BMV | ||
| 4776607 | 4776607 | PRJNA976345_P_NODE_2944_length_1266_cov_5.339561_g1987_i0 | PRJNA976345 | 2944 | 1266 | 5.339561 | 67.59884226 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 2183 | 0 | NTclustered | gi|2813517649|gb|PQ362002.1| | 381707 | g1987 | i0 | 97.788 | 32.9834123222749 | 1266 | 28 | 100 | 0 | 1 | 1266 | 7498 | 8763 | Bovine viral diarrhea virus 3 isolate HN2009, partial genome | blastn | 41757 | 2183 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 4776725 | 4776725 | PRJNA976345_P_NODE_3904_length_1008_cov_4.322713_g2795_i0 | PRJNA976345 | 3904 | 1008 | 4.322713 | 43.57294704 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1341 | 0 | NTclustered | gi|2743179417|gb|PP856402.1| | 11099 | g2795 | i0 | 90.675 | 36.0744047619048 | 1008 | 94 | 100 | 0 | 1 | 1008 | 3604 | 4611 | Bovine viral diarrhea virus 1 strain PZ33, partial genome | blastn | 36363 | 1341 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4777015 | 4777015 | PRJNA976345_P_NODE_68864_length_218_cov_1.300546_g67256_i0 | PRJNA976345 | 68864 | 218 | 1.300546 | 2.83519028 | Sobelivirales sp. | 2809868 | Viruses | Viruses | 252 | 1.77e-62 | NTclustered | gi|2647548694|gb|OR843429.1| | 2809868 | g67256 | i0 | 87.671 | 2.00917431192661 | 219 | 24 | 99 | 2 | 1 | 216 | 5646 | 5428 | Sobelivirales sp. strain MR644-18D/28050 polyprotein and hypothetical protein genes, complete cds | blastn | 438 | 252 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Sobelivirales | Sobelivirales sp. | ||||
| 5095202 | 5095202 | PRJNA976345_P_NODE_10124_length_544_cov_6.738703_g8609_i0 | PRJNA976345 | 10124 | 544 | 6.738703 | 36.65854432 | Pestivirus | 11095 | Viruses | Viruses | 758 | 0 | NTclustered | gi|1093530907|gb|KT943518.1| | 11099 | g8609 | i0 | 92.164 | 98.0863970588235 | 536 | 42 | 99 | 0 | 1 | 536 | 84 | 619 | Bovine viral diarrhea virus 1 isolate BJ1201, complete genome | blastn | 53359 | 758 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6050992 | 6050992 | PRJNA976345_P_NODE_132525_length_174_cov_1.892086_g130917_i0 | PRJNA976345 | 132525 | 174 | 1.892086 | 3.29222964 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 278 | 2.22e-70 | NTclustered | gi|1569124186|gb|MH410813.1| | 381707 | g130917 | i0 | 95.402 | 28.7413793103448 | 174 | 8 | 100 | 0 | 1 | 174 | 5051 | 5224 | Bovine viral diarrhea virus 3 isolate LV168-29/16RN, complete genome | blastn | 5001 | 278 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 6051603 | 6051603 | PRJNA976345_P_NODE_32885_length_296_cov_1.747126_g31278_i0 | PRJNA976345 | 32885 | 296 | 1.747126 | 5.17149296 | Pestivirus bovis | 3052619 | Viruses | Viruses | 385 | 2.39e-102 | NTclustered | gi|2127986404|gb|MW250802.1| | 11099 | g31278 | i0 | 91.166 | 91.1587837837838 | 283 | 25 | 96 | 0 | 1 | 283 | 2224 | 2506 | Bovine viral diarrhea virus 1 strain 68-1, complete genome | blastn | 26983 | 385 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6051732 | 6051732 | PRJNA976345_P_NODE_4185_length_959_cov_10.754329_g3030_i0 | PRJNA976345 | 4185 | 959 | 10.754329 | 103.13401511000001 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1435 | 0 | NTclustered | gi|2591518386|gb|OR482980.1| | 11099 | g3030 | i0 | 95.071 | 93.303441084463 | 913 | 44 | 95 | 1 | 1 | 912 | 913 | 1 | Bovine viral diarrhea virus 1 strain NM21 polyprotein gene, complete cds | blastn | 89478 | 1435 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6052114 | 6052114 | PRJNA976345_P_NODE_81105_length_205_cov_1.364706_g79497_i0 | PRJNA976345 | 81105 | 205 | 1.364706 | 2.7976473 | Pestivirus bovis | 3052619 | Viruses | Viruses | 303 | 4.48e-78 | NTclustered | gi|2743179417|gb|PP856402.1| | 11099 | g79497 | i0 | 94 | 69.3756097560976 | 200 | 12 | 98 | 0 | 6 | 205 | 3626 | 3825 | Bovine viral diarrhea virus 1 strain PZ33, partial genome | blastn | 14222 | 303 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7326091 | 7326091 | PRJNA976345_P_NODE_20166_length_375_cov_2.626471_g18568_i0 | PRJNA976345 | 20166 | 375 | 2.626471 | 9.84926625 | Pestivirus bovis | 3052619 | Viruses | Viruses | 569 | 7.969999999999997e-158 | NTclustered | gi|2591518386|gb|OR482980.1| | 11099 | g18568 | i0 | 94.118 | 99.8933333333333 | 374 | 22 | 99 | 0 | 1 | 374 | 10567 | 10194 | Bovine viral diarrhea virus 1 strain NM21 polyprotein gene, complete cds | blastn | 37460 | 569 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7326422 | 7326422 | PRJNA976345_P_NODE_47806_length_252_cov_1.820276_g46198_i0 | PRJNA976345 | 47806 | 252 | 1.820276 | 4.58709552 | Pestivirus bovis | 3052619 | Viruses | Viruses | 405 | 1.52e-108 | NTclustered | gi|2997667|gb|AF052303.1| | 11099 | g46198 | i0 | 95.984 | 46.9246031746032 | 249 | 10 | 99 | 0 | 4 | 252 | 369 | 121 | Pestivirus type 1 strain Bega polyprotein gene, partial cds | blastn | 11825 | 405 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7326635 | 7326635 | PRJNA976345_P_NODE_70406_length_216_cov_1.640884_g68798_i0 | PRJNA976345 | 70406 | 216 | 1.640884 | 3.54430944 | Pestivirus bovis | 3052619 | Viruses | Viruses | 313 | 7.92e-81 | NTclustered | gi|2563906172|gb|ON732849.1| | 11099 | g68798 | i0 | 93.75 | 96.0925925925926 | 208 | 13 | 96 | 0 | 9 | 216 | 1946 | 2153 | Bovine viral diarrhea virus 1 isolate SDJN01, complete genome | blastn | 20756 | 313 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7645488 | 7645488 | PRJNA976345_P_NODE_63666_length_224_cov_2.423280_g62058_i0 | PRJNA976345 | 63666 | 224 | 2.42328 | 5.4281472 | Pestivirus | 11095 | Viruses | Viruses | 368 | 1.74e-97 | NTclustered | gi|2563906172|gb|ON732849.1| | 11099 | g62058 | i0 | 96.413 | 95.5357142857143 | 223 | 8 | 99 | 0 | 2 | 224 | 3380 | 3602 | Bovine viral diarrhea virus 1 isolate SDJN01, complete genome | blastn | 21400 | 370 | 0.994594594594595 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8600769 | 8600769 | PRJNA976345_P_NODE_143427_length_169_cov_1.776119_g141819_i0 | PRJNA976345 | 143427 | 169 | 1.776119 | 3.00164111 | Pestivirus bovis | 3052619 | Viruses | Viruses | 220 | 3.66e-53 | NTclustered | gi|2127986404|gb|MW250802.1| | 11099 | g141819 | i0 | 90.419 | 5.9585798816568 | 167 | 16 | 99 | 0 | 3 | 169 | 9585 | 9419 | Bovine viral diarrhea virus 1 strain 68-1, complete genome | blastn | 1007 | 220 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8601363 | 8601363 | PRJNA976345_P_NODE_38927_length_275_cov_2.112500_g37320_i0 | PRJNA976345 | 38927 | 275 | 2.1125 | 5.809375 | Pestivirus bovis | 3052619 | Viruses | Viruses | 398 | 2.8199999999999996e-106 | NTclustered | gi|2127986404|gb|MW250802.1| | 11099 | g37320 | i0 | 92.727 | 18.9927272727273 | 275 | 20 | 100 | 0 | 1 | 275 | 632 | 906 | Bovine viral diarrhea virus 1 strain 68-1, complete genome | blastn | 5223 | 398 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 8601723 | 8601723 | PRJNA976345_P_NODE_73487_length_212_cov_2.779661_g71879_i0 | PRJNA976345 | 73487 | 212 | 2.779661 | 5.89288132 | Pestivirus bovis | 3052619 | Viruses | Viruses | 281 | 2.18e-71 | NTclustered | gi|2127986404|gb|MW250802.1| | 11099 | g71879 | i0 | 90.566 | 23.2547169811321 | 212 | 20 | 100 | 0 | 1 | 212 | 11385 | 11174 | Bovine viral diarrhea virus 1 strain 68-1, complete genome | blastn | 4930 | 281 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9875792 | 9875792 | PRJNA976345_P_NODE_11008_length_519_cov_2.797521_g9471_i0 | PRJNA976345 | 11008 | 519 | 2.797521 | 14.51913399 | Pestivirus bovis | 3052619 | Viruses | Viruses | 545 | 1.91e-150 | NTclustered | gi|2743179417|gb|PP856402.1| | 11099 | g9471 | i0 | 85.714 | 33.5433526011561 | 518 | 72 | 99 | 2 | 3 | 519 | 2579 | 2063 | Bovine viral diarrhea virus 1 strain PZ33, partial genome | blastn | 17409 | 545 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 9876300 | 9876300 | PRJNA976345_P_NODE_189408_length_153_cov_1.000000_g187800_i0 | PRJNA976345 | 189408 | 153 | 1 | 1.53 | Trichovirus mali | 12175 | Viruses | Viruses | 217 | 4.2e-52 | NTclustered | gi|1214575058|gb|KY310578.1| | 12175 | g187800 | i0 | 92.157 | 100.509803921569 | 153 | 12 | 100 | 0 | 1 | 153 | 7318 | 7470 | Trichovirus mali isolate MB, complete genome | blastn | 15378 | 217 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Trichovirus | Trichovirus mali | ||
| 9876329 | 9876329 | PRJNA976345_P_NODE_195428_length_151_cov_1.439655_g193820_i0 | PRJNA976345 | 195428 | 151 | 1.439655 | 2.17387905 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 263 | 5.23e-66 | NTclustered | gi|2813517649|gb|PQ362002.1| | 381707 | g193820 | i0 | 98.013 | 26.794701986755 | 151 | 3 | 100 | 0 | 1 | 151 | 2357 | 2507 | Bovine viral diarrhea virus 3 isolate HN2009, partial genome | blastn | 4046 | 263 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 10195902 | 10195902 | PRJNA976345_P_NODE_27428_length_322_cov_1.902439_g25824_i0 | PRJNA976345 | 27428 | 322 | 1.902439 | 6.12585358 | Potexvirus | 12176 | Viruses | Viruses | 579 | 1.1199999999999997e-160 | NTclustered | gi|1674914793|gb|MK391570.1| | 112229 | g25824 | i0 | 99.068 | 100 | 322 | 3 | 100 | 0 | 1 | 322 | 4377 | 4056 | Pepino mosaic virus isolate PMV/DIA131, complete genome | blastn | 32200 | 579 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 11151963 | 11151963 | PRJNA976345_P_NODE_3529_length_1090_cov_25.818957_g2476_i0 | PRJNA976345 | 3529 | 1090 | 25.818957 | 281.4266313 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 1903 | 0 | NTclustered | gi|2813517649|gb|PQ362002.1| | 381707 | g2476 | i0 | 98.087 | 61.3009174311927 | 1098 | 12 | 99 | 5 | 2 | 1090 | 15 | 1112 | Bovine viral diarrhea virus 3 isolate HN2009, partial genome | blastn | 66818 | 1903 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 12427192 | 12427192 | PRJNA976345_P_NODE_1590_length_2326_cov_8.399825_g942_i0 | PRJNA976345 | 1590 | 2326 | 8.399825 | 195.3799295 | Pestivirus bovis | 3052619 | Viruses | Viruses | 3275 | 0 | NTclustered | gi|1831805881|emb|LR760748.1| | 11099 | g942 | i0 | 92.086 | 99.8159931212382 | 2325 | 184 | 99 | 0 | 1 | 2325 | 8763 | 11087 | Bovine viral diarrhea virus 1 complete genome gene for viral polyprotein | blastn | 232172 | 3275 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12427275 | 12427275 | PRJNA976345_P_NODE_170370_length_159_cov_0.959677_g168762_i0 | PRJNA976345 | 170370 | 159 | 0.959677 | 1.52588643 | Pestivirus bovis | 3052619 | Viruses | Viruses | 239 | 9.42e-59 | NTclustered | gi|1831805881|emb|LR760748.1| | 11099 | g168762 | i0 | 93.711 | 18.377358490566 | 159 | 10 | 100 | 0 | 1 | 159 | 9765 | 9923 | Bovine viral diarrhea virus 1 complete genome gene for viral polyprotein | blastn | 2922 | 239 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12427492 | 12427492 | PRJNA976345_P_NODE_22710_length_353_cov_2.188679_g21109_i0 | PRJNA976345 | 22710 | 353 | 2.188679 | 7.72603687 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 619 | 7.299999999999999e-173 | NTclustered | gi|2624695972|gb|OR827365.1| | 381707 | g21109 | i0 | 98.3 | 33.728045325779 | 353 | 6 | 100 | 0 | 1 | 353 | 7387 | 7035 | Bovine viral diarrhea virus 3 isolate CNIM-2201, partial genome | blastn | 11906 | 619 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 12427930 | 12427930 | PRJNA976345_P_NODE_61830_length_227_cov_1.656250_g60222_i0 | PRJNA976345 | 61830 | 227 | 1.65625 | 3.7596875 | Pestivirus bovis | 3052619 | Viruses | Viruses | 287 | 5.09e-73 | NTclustered | gi|2127986390|gb|MW054940.1| | 11099 | g60222 | i0 | 89.474 | 32.863436123348 | 228 | 22 | 100 | 2 | 1 | 227 | 10194 | 9968 | Bovine viral diarrhea virus 1 strain MA/101/05, complete genome | blastn | 7460 | 287 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13701616 | 13701616 | PRJNA976345_P_NODE_15631_length_429_cov_1.994924_g14046_i0 | PRJNA976345 | 15631 | 429 | 1.994924 | 8.55822396 | Potexvirus pepini | 3433856 | Viruses | Viruses | 784 | 0 | NTclustered | gi|1740135758|gb|MN182534.1| | 112229 | g14046 | i0 | 99.766 | 95.8811188811189 | 427 | 1 | 99 | 0 | 3 | 429 | 6405 | 5979 | Pepino mosaic virus strain PMV.21930919, complete genome | blastn | 41133 | 784 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 13701864 | 13701864 | PRJNA976345_P_NODE_194511_length_151_cov_1.931034_g192903_i0 | PRJNA976345 | 194511 | 151 | 1.931034 | 2.91586134 | Pestivirus bovis | 3052619 | Viruses | Viruses | 215 | 1.49e-51 | NTclustered | gi|2127986404|gb|MW250802.1| | 11099 | g192903 | i0 | 92.617 | 0.986754966887417 | 149 | 11 | 99 | 0 | 3 | 151 | 10320 | 10172 | Bovine viral diarrhea virus 1 strain 68-1, complete genome | blastn | 149 | 215 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13702313 | 13702313 | PRJNA976345_P_NODE_54851_length_238_cov_1.945813_g53243_i0 | PRJNA976345 | 54851 | 238 | 1.945813 | 4.63103494 | Bromovirus BMV | 3427622 | Viruses | Viruses | 435 | 1.8200000000000003e-117 | NTclustered | gi|176121034|ref|NC_002028.2| | 12302 | g53243 | i0 | 99.58 | 37.0294117647059 | 238 | 1 | 100 | 0 | 1 | 238 | 867 | 1104 | Brome mosaic virus RNA 3, complete sequence | blastn | 8813 | 435 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Bromoviridae | Bromovirus | Bromovirus BMV | ||
| 13702479 | 13702479 | PRJNA976345_P_NODE_7291_length_661_cov_21.380192_g2476_i2 | PRJNA976345 | 7291 | 661 | 21.380192 | 141.32306912 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 1061 | 0 | NTclustered | gi|390189254|gb|JQ612704.1| | 381707 | g2476 | i2 | 96.319 | 61.0211800302572 | 652 | 12 | 98 | 2 | 1 | 651 | 665 | 25 | Bovine viral diarrhea virus 3 strain Italy-83/10-ncp, complete genome | blastn | 40335 | 1061 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 13702498 | 13702498 | PRJNA976345_P_NODE_74631_length_211_cov_2.244318_g73023_i0 | PRJNA976345 | 74631 | 211 | 2.244318 | 4.73551098 | Trichovirus mali | 12175 | Viruses | Viruses | 374 | 3.4799999999999995e-99 | NTclustered | gi|55818671|emb|AJ586644.1| | 12175 | g73023 | i0 | 98.578 | 98.7109004739336 | 211 | 3 | 100 | 0 | 1 | 211 | 249 | 459 | Apple chlorotic leaf spot virus partial mRNA for coat protein (cp gene), isolate PE-FC | blastn | 20828 | 374 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Trichovirus | Trichovirus mali | ||
| 14975772 | 14975772 | PRJNA976345_P_NODE_145112_length_168_cov_2.263158_g143504_i0 | PRJNA976345 | 145112 | 168 | 2.263158 | 3.80210544 | Pestivirus bovis | 3052619 | Viruses | Viruses | 272 | 9.95e-69 | NTclustered | gi|972905812|gb|KU200260.1| | 11099 | g143504 | i0 | 95.833 | 100.72619047619 | 168 | 7 | 100 | 0 | 1 | 168 | 5159 | 4992 | Bovine viral diarrhea virus 1, partial genome | blastn | 16922 | 272 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16251137 | 16251137 | PRJNA976345_P_NODE_2273_length_1602_cov_5.516911_g1438_i0 | PRJNA976345 | 2273 | 1602 | 5.516911 | 88.38091422 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 2826 | 0 | NTclustered | gi|2813517649|gb|PQ362002.1| | 381707 | g1438 | i0 | 98.502 | 72.2403245942572 | 1602 | 24 | 100 | 0 | 1 | 1602 | 6946 | 5345 | Bovine viral diarrhea virus 3 isolate HN2009, partial genome | blastn | 115729 | 2826 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 16251251 | 16251251 | PRJNA976345_P_NODE_31913_length_300_cov_1.781132_g30307_i0 | PRJNA976345 | 31913 | 300 | 1.781132 | 5.343396 | Pestivirus bovis | 3052619 | Viruses | Viruses | 477 | 3.8899999999999985e-130 | NTclustered | gi|586616531|gb|KF896608.1| | 11099 | g30307 | i0 | 95.333 | 55.5 | 300 | 14 | 100 | 0 | 1 | 300 | 10677 | 10976 | Bovine viral diarrhea virus 1 isolate Bega-like polyprotein gene, complete cds | blastn | 16650 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17526346 | 17526346 | PRJNA976345_P_NODE_24834_length_338_cov_1.356436_g23231_i0 | PRJNA976345 | 24834 | 338 | 1.356436 | 4.58475368 | Pestivirus bovis | 3052619 | Viruses | Viruses | 492 | 1.59e-134 | NTclustered | gi|2743179417|gb|PP856402.1| | 11099 | g23231 | i0 | 92.899 | 26.7366863905325 | 338 | 24 | 100 | 0 | 1 | 338 | 9273 | 8936 | Bovine viral diarrhea virus 1 strain PZ33, partial genome | blastn | 9037 | 492 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17526492 | 17526492 | PRJNA976345_P_NODE_3694_length_1051_cov_9.241142_g2616_i0 | PRJNA976345 | 3694 | 1051 | 9.241142 | 97.12440242 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1589 | 0 | NTclustered | gi|1821514970|gb|MT079816.1| | 11099 | g2616 | i0 | 94.97 | 93.4081826831589 | 1014 | 50 | 96 | 1 | 39 | 1051 | 2 | 1015 | Bovine viral diarrhea virus 1 isolate GXNN1, complete genome | blastn | 98172 | 1589 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17526824 | 17526824 | PRJNA976345_P_NODE_69094_length_217_cov_2.873626_g67486_i0 | PRJNA976345 | 69094 | 217 | 2.873626 | 6.23576842 | Pestivirus bovis | 3052619 | Viruses | Viruses | 351 | 1.69e-92 | NTclustered | gi|1418359717|dbj|LC068605.1| | 11099 | g67486 | i0 | 95.853 | 99.6497695852535 | 217 | 9 | 100 | 0 | 1 | 217 | 10997 | 10781 | Bovine viral diarrhea virus 1 genomic RNA, complete genome, strain: No.12_E- | blastn | 21624 | 351 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 17844928 | 17844928 | PRJNA976345_P_NODE_5074_length_835_cov_13.930000_g2476_i1 | PRJNA976345 | 5074 | 835 | 13.93 | 116.3155 | Pestivirus | 11095 | Viruses | Viruses | 955 | 0 | NTclustered | gi|511775164|gb|KC757383.1| | 11099 | g2476 | i1 | 89.031 | 63.1988023952096 | 784 | 69 | 93 | 15 | 1 | 775 | 850 | 75 | Bovine viral diarrhea virus 1 isolate 10JJ-SKR, complete genome | blastn | 52771 | 959 | 0.995828988529718 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18799946 | 18799946 | PRJNA976345_P_NODE_191815_length_152_cov_1.538462_g190207_i0 | PRJNA976345 | 191815 | 152 | 1.538462 | 2.33846224 | Pestivirus bovis | 3052619 | Viruses | Viruses | 261 | 1.9e-65 | NTclustered | gi|2905035930|gb|PQ782224.1| | 11099 | g190207 | i0 | 98 | 55.5328947368421 | 150 | 3 | 99 | 0 | 1 | 150 | 9305 | 9454 | Bovine viral diarrhea virus 1 isolate BVDV-1c-IM-2018, complete genome | blastn | 8441 | 261 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18800017 | 18800017 | PRJNA976345_P_NODE_2115_length_1720_cov_5.297923_g1325_i0 | PRJNA976345 | 2115 | 1720 | 5.297923 | 91.1242756 | Pestivirus brazilense | 3052620 | Viruses | Viruses | 2117 | 0 | NTclustered | gi|2813517653|gb|PQ362004.1| | 381707 | g1325 | i0 | 97.8 | 31.5360465116279 | 1227 | 27 | 99 | 0 | 1 | 1227 | 10421 | 9195 | Bovine viral diarrhea virus 3 isolate HN2168, partial genome | blastn | 54242 | 2117 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus brazilense | ||
| 18800751 | 18800751 | PRJNA976345_P_NODE_96875_length_192_cov_1.630573_g95267_i0 | PRJNA976345 | 96875 | 192 | 1.630573 | 3.13070016 | Pestivirus bovis | 3052619 | Viruses | Viruses | 305 | 1.15e-78 | NTclustered | gi|2263978342|gb|ON337882.1| | 11099 | g95267 | i0 | 95.312 | 48.4895833333333 | 192 | 9 | 100 | 0 | 1 | 192 | 6242 | 6433 | Bovine viral diarrhea virus 1 isolate NM2103, complete genome | blastn | 9310 | 305 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19118996 | 19118996 | PRJNA976345_P_NODE_97075_length_192_cov_1.471338_g95467_i0 | PRJNA976345 | 97075 | 192 | 1.471338 | 2.82496896 | Potexvirus | 12176 | Viruses | Viruses | 355 | 1.13e-93 | NTclustered | gi|1421680767|gb|MH550257.1| | 112229 | g95467 | i0 | 100 | 100 | 192 | 0 | 100 | 0 | 1 | 192 | 1382 | 1573 | Pepino mosaic virus isolate GR17-8b TGBp1, TGBp2, TGBp3, and CP genes, complete cds | blastn | 19200 | 355 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Alphaflexiviridae | Potexvirus | Potexvirus pepini | ||
| 20074433 | 20074433 | PRJNA976345_P_NODE_137276_length_172_cov_1.474453_g135668_i0 | PRJNA976345 | 137276 | 172 | 1.474453 | 2.53605916 | Sapovirus sp. | 1906670 | Viruses | Viruses | 165 | 1.78e-36 | NTclustered | gi|2196304084|gb|MZ679047.1| | 1906670 | g135668 | i0 | 87.413 | 284.970930232558 | 143 | 18 | 83 | 0 | 28 | 170 | 1616 | 1474 | MAG: Sapovirus sp. isolate R16-k141_22382 polyprotein gene, partial cds | blastn | 49015 | 165 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Caliciviridae | Sapovirus | Sapovirus sp. | ||
| 20075243 | 20075243 | PRJNA976345_P_NODE_55736_length_236_cov_2.786070_g54128_i0 | PRJNA976345 | 55736 | 236 | 2.78607 | 6.5751252 | Pestivirus bovis | 3052619 | Viruses | Viruses | 364 | 2.39e-96 | NTclustered | gi|586616531|gb|KF896608.1| | 11099 | g54128 | i0 | 94.492 | 22.9618644067797 | 236 | 13 | 100 | 0 | 1 | 236 | 9220 | 8985 | Bovine viral diarrhea virus 1 isolate Bega-like polyprotein gene, complete cds | blastn | 5419 | 364 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21350087 | 21350087 | PRJNA976345_P_NODE_172617_length_158_cov_1.357724_g171009_i0 | PRJNA976345 | 172617 | 158 | 1.357724 | 2.14520392 | Pestivirus bovis | 3052619 | Viruses | Viruses | 270 | 3.3099999999999996e-68 | NTclustered | gi|28071149|dbj|AB078951.1| | 11099 | g171009 | i0 | 97.468 | 99.2848101265823 | 158 | 4 | 100 | 0 | 1 | 158 | 11900 | 12057 | Bovine viral diarrhea virus 1 gene for polyprotein, complete cds, strain:Nose | blastn | 15687 | 270 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21350661 | 21350661 | PRJNA976345_P_NODE_51277_length_245_cov_1.600000_g49669_i0 | PRJNA976345 | 51277 | 245 | 1.6 | 3.92 | Pestivirus bovis | 3052619 | Viruses | Viruses | 387 | 5.34e-103 | NTclustered | gi|14113964|gb|AF049221.2|AF049221 | 158476 | g49669 | i0 | 95.102 | 96.0489795918367 | 245 | 12 | 100 | 0 | 1 | 245 | 503 | 747 | Bovine viral diarrhea virus strain Bega polyprotein gene, partial cds | blastn | 23532 | 387 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21350696 | 21350696 | PRJNA976345_P_NODE_53697_length_240_cov_2.121951_g52089_i0 | PRJNA976345 | 53697 | 240 | 2.121951 | 5.0926824 | Pestivirus bovis | 3052619 | Viruses | Viruses | 388 | 1.45e-103 | NTclustered | gi|1831805881|emb|LR760748.1| | 11099 | g52089 | i0 | 95.833 | 43.9666666666667 | 240 | 10 | 100 | 0 | 1 | 240 | 7562 | 7323 | Bovine viral diarrhea virus 1 complete genome gene for viral polyprotein | blastn | 10552 | 388 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22624998 | 22624998 | PRJNA976345_P_NODE_155938_length_164_cov_1.372093_g154330_i0 | PRJNA976345 | 155938 | 164 | 1.372093 | 2.25023252 | Pestivirus bovis | 3052619 | Viruses | Viruses | 281 | 1.6000000000000001e-71 | NTclustered | gi|2997667|gb|AF052303.1| | 11099 | g154330 | i0 | 97.561 | 37.8109756097561 | 164 | 4 | 100 | 0 | 1 | 164 | 1539 | 1376 | Pestivirus type 1 strain Bega polyprotein gene, partial cds | blastn | 6201 | 281 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 22625766 | 22625766 | PRJNA976345_P_NODE_64898_length_223_cov_1.255319_g63290_i0 | PRJNA976345 | 64898 | 223 | 1.255319 | 2.79936137 | Pestivirus bovis | 3052619 | Viruses | Viruses | 340 | 3.77e-89 | NTclustered | gi|2743179417|gb|PP856402.1| | 11099 | g63290 | i0 | 94.17 | 17.5739910313901 | 223 | 13 | 100 | 0 | 1 | 223 | 4289 | 4067 | Bovine viral diarrhea virus 1 strain PZ33, partial genome | blastn | 3919 | 340 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23900623 | 23900623 | PRJNA976345_P_NODE_177319_length_156_cov_2.231405_g175711_i0 | PRJNA976345 | 177319 | 156 | 2.231405 | 3.4809918 | Pestivirus bovis | 3052619 | Viruses | Viruses | 254 | 3.28e-63 | NTclustered | gi|1821514970|gb|MT079816.1| | 11099 | g175711 | i0 | 96.129 | 82.775641025641 | 155 | 6 | 99 | 0 | 1 | 155 | 4983 | 5137 | Bovine viral diarrhea virus 1 isolate GXNN1, complete genome | blastn | 12913 | 254 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25173971 | 25173971 | PRJNA976345_P_NODE_143680_length_169_cov_1.611940_g142072_i0 | PRJNA976345 | 143680 | 169 | 1.61194 | 2.7241786 | Pestivirus bovis | 3052619 | Viruses | Viruses | 250 | 4.66e-62 | NTclustered | gi|14113964|gb|AF049221.2|AF049221 | 158476 | g142072 | i0 | 93.452 | 31.508875739645 | 168 | 11 | 99 | 0 | 1 | 168 | 1833 | 1666 | Bovine viral diarrhea virus strain Bega polyprotein gene, partial cds | blastn | 5325 | 250 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25174484 | 25174484 | PRJNA976345_P_NODE_36460_length_283_cov_1.923387_g34853_i0 | PRJNA976345 | 36460 | 283 | 1.923387 | 5.44318521 | Pestivirus bovis | 3052619 | Viruses | Viruses | 359 | 1.37e-94 | NTclustered | gi|2641397845|dbj|LC792394.1| | 11099 | g34853 | i0 | 90 | 98.7597173144876 | 280 | 24 | 98 | 4 | 1 | 278 | 596 | 319 | Bovine viral diarrhea virus 1 BVDV/Hamanaka/2138/23 gene for polyprotein, partial cds | blastn | 27949 | 359 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;