contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3498459 | 3498459 | PRJNA976345_P_NODE_138723_length_171_cov_2.051471_g137115_i0 | PRJNA976345 | 138723 | 171 | 2.051471 | 3.50801541 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 228 | 2.219999999999999e-55 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g137115 | i0 | 91.071 | 288.701754385965 | 168 | 15 | 98 | 0 | 4 | 171 | 27443 | 27276 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 49368 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 3498560 | 3498560 | PRJNA976345_P_NODE_153323_length_165_cov_1.415385_g151715_i0 | PRJNA976345 | 153323 | 165 | 1.415385 | 2.33538525 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 243 | 7.63e-60 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g151715 | i0 | 94.839 | 13.8909090909091 | 155 | 8 | 94 | 0 | 1 | 155 | 1310 | 1464 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 2292 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 4776099 | 4776099 | PRJNA976345_P_NODE_13324_length_468_cov_2.635104_g11752_i0 | PRJNA976345 | 13324 | 468 | 2.635104 | 12.33228672 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 217 | 1.52e-51 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g11752 | i0 | 83.193 | 0.508547008547009 | 238 | 38 | 51 | 2 | 231 | 467 | 9202614 | 9202378 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 238 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 8601757 | 8601757 | PRJNA976345_P_NODE_77867_length_208_cov_1.595376_g76259_i0 | PRJNA976345 | 77867 | 208 | 1.595376 | 3.31838208 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 307 | 3.52e-79 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g76259 | i0 | 93.269 | 247.432692307692 | 208 | 14 | 100 | 0 | 1 | 208 | 16032 | 15825 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 51466 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 9876103 | 9876103 | PRJNA976345_P_NODE_155448_length_164_cov_1.674419_g153840_i0 | PRJNA976345 | 155448 | 164 | 1.674419 | 2.74604716 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 248 | 1.63e-61 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g153840 | i0 | 93.902 | 1 | 164 | 10 | 100 | 0 | 1 | 164 | 1005132 | 1004969 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 164 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 9877056 | 9877056 | PRJNA976345_P_NODE_88288_length_198_cov_3.429448_g86680_i0 | PRJNA976345 | 88288 | 198 | 3.429448 | 6.79030704 | Victivallaceae bacterium | 2793042 | Bacteria | Bacteria | 52.8 | 0.017 | NTclustered | gi|2621704067|emb|OY761536.1| | 2793042 | g86680 | i0 | 100 | 0.141414141414141 | 28 | 0 | 14 | 0 | 139 | 166 | 3021920 | 3021893 | MAG: Victivallaceae bacterium isolate e353ef71-700a-4510-b67c-5bed4426050c genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallaceae | Victivallaceae bacterium | ||
| 12426919 | 12426919 | PRJNA976345_P_NODE_121270_length_178_cov_2.426573_g119662_i0 | PRJNA976345 | 121270 | 178 | 2.426573 | 4.31929994 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1938775668|gb|CP054178.1| | 2026777 | g119662 | i0 | 100 | 0.162921348314607 | 29 | 0 | 16 | 0 | 150 | 178 | 3200882 | 3200854 | MAG: Phycisphaeraceae bacterium isolate H1_PLA4 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 17526042 | 17526042 | PRJNA976345_P_NODE_158594_length_163_cov_1.250000_g156986_i0 | PRJNA976345 | 158594 | 163 | 1.25 | 2.0375 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 65.8 | 1.75e-6 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g156986 | i0 | 97.368 | 0.730061349693252 | 38 | 1 | 23 | 0 | 23 | 60 | 6442187 | 6442150 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 119 | 65.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18799387 | 18799387 | PRJNA976345_P_NODE_105115_length_186_cov_2.443709_g103507_i0 | PRJNA976345 | 105115 | 186 | 2.443709 | 4.54529874 | Bremerella sp. TYQ1 | 3119568 | Bacteria | Bacteria | 87.9 | 4.36e-13 | NTclustered | gi|2101355205|gb|CP083740.1| | 3119568 | g103507 | i0 | 84.884 | 0.462365591397849 | 86 | 13 | 46 | 0 | 1 | 86 | 6520934 | 6521019 | Bremerella sp. TYQ1 chromosome, complete genome | blastn | 86 | 87.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella sp. TYQ1 | |
| 18800103 | 18800103 | PRJNA976345_P_NODE_26855_length_325_cov_2.379310_g25252_i0 | PRJNA976345 | 26855 | 325 | 2.37931 | 7.7327575 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 412 | 1.2199999999999999e-110 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g25252 | i0 | 89.571 | 244.270769230769 | 326 | 33 | 100 | 1 | 1 | 325 | 735850 | 736175 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 79388 | 412 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23900533 | 23900533 | PRJNA976345_P_NODE_164659_length_160_cov_6.184000_g163051_i0 | PRJNA976345 | 164659 | 160 | 6.184 | 9.8944 | Lentisphaera profundi | 1658616 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2445967839|gb|CP117812.1| | 1658616 | g163051 | i0 | 100 | 0.18125 | 29 | 0 | 18 | 0 | 112 | 140 | 2068251 | 2068279 | Lentisphaera profundi strain SAORIC-696 chromosome 2, complete sequence | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaera | Lentisphaera profundi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;