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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA976345" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA976345 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3498366 3498366 PRJNA976345_P_NODE_125703_length_177_cov_2.781690_g124095_i0 PRJNA976345 125703 177 2.78169 4.9235913 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|66813473|ref|XM_635824.1| 352472 g124095 i0 96.875 0.180790960451977 32 1 18 0 110 141 1956 1987 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0281257) mRNA, complete cds blastn 32 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3498908 3498908 PRJNA976345_P_NODE_24563_length_339_cov_4.200658_g22960_i0 PRJNA976345 24563 339 4.200658 14.24023062 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 6.88e-4   NTclustered gi|831782199|ref|XM_012901153.1| 1410327 g22960 i0 100 0.176991150442478 31 0 9 0 106 136 185 155 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 60 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
6051021 6051021 PRJNA976345_P_NODE_135885_length_172_cov_3.656934_g134277_i0 PRJNA976345 135885 172 3.656934 6.28992648 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.014   NTclustered gi|66828268|ref|XM_642397.1| 352472 g134277 i0 100 0.162790697674419 28 0 16 0 68 95 1574 1547 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0268420) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7325557 7325557 PRJNA976345_P_NODE_113606_length_181_cov_2.178082_g111998_i0 PRJNA976345 113606 181 2.178082 3.94232842 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.015   NTclustered gi|1160566148|ref|XM_020580696.1| 670386 g111998 i0 100 0.154696132596685 28 0 15 0 80 107 124 151 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
8600558 8600558 PRJNA976345_P_NODE_109787_length_183_cov_3.135135_g108179_i0 PRJNA976345 109787 183 3.135135 5.73729705 Protostelium mycophagum 472931 Evosea other_Eukaryota 333 4.97e-87   NTclustered gi|262262899|gb|FJ766442.1| 472931 g108179 i0 100 32.0054644808743 180 0 98 0 4 183 726 547 Protostelium mycophagum strain TB-A2-1 small subunit ribosomal RNA gene, partial sequence blastn 5857 333 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
8919733 8919733 PRJNA976345_P_NODE_100207_length_190_cov_1.012903_g98599_i0 PRJNA976345 100207 190 1.012903 1.9245157 root 1 Root_unresolved Root_unresolved 346 6.690000000000001e-91   NTclustered gi|1057487664|gb|KX539393.1| 133408 g98599 i0 99.474 100 190 1 100 0 1 190 366 555 Acytostelium leptosomum strain FG12A RNA polymerase I (rpa1) gene, partial cds blastn 19000 346 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
11151255 11151255 PRJNA976345_P_NODE_115689_length_180_cov_1.813793_g114081_i0 PRJNA976345 115689 180 1.813793 3.2648274 Protostelium mycophagum 472931 Evosea other_Eukaryota 327 2.2699999999999996e-85   NTclustered gi|262262899|gb|FJ766442.1| 472931 g114081 i0 99.444 49.5833333333333 180 1 100 0 1 180 1237 1416 Protostelium mycophagum strain TB-A2-1 small subunit ribosomal RNA gene, partial sequence blastn 8925 327 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
16251588 16251588 PRJNA976345_P_NODE_63933_length_224_cov_1.740741_g62325_i0 PRJNA976345 63933 224 1.740741 3.89925984 Entamoeba dispar 46681 Evosea other_Eukaryota 52.8 0.02   NTclustered gi|167391950|ref|XM_001739911.1| 370354 g62325 i0 100 0.125 28 0 13 0 130 157 312 339 Entamoeba dispar SAW760 serine/threonine protein phosphatase, putative (EDI_228200), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
17525662 17525662 PRJNA976345_P_NODE_104074_length_187_cov_1.750000_g102466_i0 PRJNA976345 104074 187 1.75 3.2725 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|3068582|gb|AF000580.1|AF000580 44689 g102466 i0 100 0.155080213903743 29 0 16 0 86 114 11679 11707 Dictyostelium discoideum plasmid Ddp5, complete genome blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22625246 22625246 PRJNA976345_P_NODE_196378_length_151_cov_1.034483_g194770_i0 PRJNA976345 196378 151 1.034483 1.56206933 Heterostelium album 2086695 Evosea other_Eukaryota 171 3.26e-38   NTclustered gi|1160558366|ref|XM_020576016.1| 670386 g194770 i0 90.076 87.9470198675497 131 13 87 0 21 151 946 1076 Polysphondylium pallidum PN500 actin domain-containing protein (fia), partial mRNA blastn 13280 171 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
23900168 23900168 PRJNA976345_P_NODE_111659_length_182_cov_2.476190_g110051_i0 PRJNA976345 111659 182 2.47619 4.5066658 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.015   NTclustered gi|66812931|ref|XM_635553.1| 352472 g110051 i0 94.286 0.192307692307692 35 1 19 1 61 95 408 375 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0281789) mRNA, complete cds blastn 35 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
23900598 23900598 PRJNA976345_P_NODE_17379_length_405_cov_2.143243_g15788_i0 PRJNA976345 17379 405 2.143243 8.68013415 Dictyostelium purpureum 5786 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|330789920|ref|XM_003282999.1| 5786 g15788 i0 92.5 0.0987654320987654 40 2 10 1 190 229 834 796 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_146659), partial mRNA blastn 40 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;