RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA975724 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16248328 16248328 PRJNA975724_S_NODE_14913_length_413_cov_6.579412_g14732_i0 PRJNA975724 14913 413 6.579412 27.17297156 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 163 1.76e-35   NTclustered gi|294953618|ref|XM_002787808.1| 423536 g14732 i0 84.118 2.67070217917676 170 25 41 2 245 413 463 295 Perkinsus marinus ATCC 50983 40S ribosomal protein S14, putative, mRNA blastn 1103 163 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
17523410 17523410 PRJNA975724_S_NODE_11594_length_436_cov_10.115702_g11413_i0 PRJNA975724 11594 436 10.115702 44.10446072 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 183 1.43e-41   NTclustered gi|294925483|ref|XM_002778887.1| 423536 g11413 i0 82.464 28.0848623853211 211 35 48 2 6 215 235 444 Perkinsus marinus ATCC 50983 ribosomal protein S23, putative, mRNA blastn 12245 183 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;