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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA975724 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
945381 945381 PRJNA975724_S_NODE_11341_length_438_cov_25.397260_g11160_i0 PRJNA975724 11341 438 25.39726 111.2399988 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 228 6.549999999999998e-55   NTclustered gi|813141452|ref|XM_012343573.1| 695850 g11160 i0 80.887 7.51369863013699 293 52 66 4 107 397 767 477 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L8 mRNA blastn 3291 228 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
945500 945500 PRJNA975724_S_NODE_16241_length_405_cov_6.641566_g16060_i0 PRJNA975724 16241 405 6.641566 26.8983423 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 141 8.06e-29   NTclustered gi|2794917624|ref|XM_067894101.1| 164328 g16060 i0 79.803 2.12592592592593 203 33 49 7 29 227 786 984 Phytophthora ramorum Cytochrome c peroxidase, mitochondrial (KRP23_8638), partial mRNA blastn 861 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
945998 945998 PRJNA975724_S_NODE_35521_length_331_cov_2.348837_g35340_i0 PRJNA975724 35521 331 2.348837 7.77465047 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 119 3.03e-22   NTclustered gi|2795057987|ref|XM_067936138.1| 4785 g35340 i0 85.217 27.6012084592145 115 17 35 0 4 118 1707 1821 Phytophthora cinnamomi Electron transfer flavoprotein-ubiquinone oxidoreductase (IUM83_11567), partial mRNA blastn 9136 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
3496371 3496371 PRJNA975724_S_NODE_25063_length_365_cov_4.253425_g24882_i0 PRJNA975724 25063 365 4.253425 15.52500125 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 265 4.09e-66   NTclustered gi|695438657|ref|XM_009534219.1| 67593 g24882 i0 82.838 36.3616438356164 303 44 82 7 65 363 1203 905 Phytophthora sojae hypothetical protein partial mRNA blastn 13272 265 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
3818760 3818760 PRJNA975724_S_NODE_27903_length_355_cov_1.918440_g27722_i0 PRJNA975724 27903 355 1.91844 6.810462 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 267 1.1e-66   NTclustered gi|2308292407|gb|OK574296.1| 129350 g27722 i0 81.875 83.4253521126761 320 54 90 4 38 355 8196 8513 Phytophthora colocasiae voucher Fj20_1 mitochondrion, complete genome blastn 29616 267 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora colocasiae
4774217 4774217 PRJNA975724_S_NODE_3184_length_583_cov_17.943137_g3010_i0 PRJNA975724 3184 583 17.943137 104.60848871 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 202 5.4e-47   NTclustered gi|669151349|ref|XM_008613015.1| 1156394 g3010 i0 83.117 27.1989708404803 231 30 39 7 332 556 1594 1367 Saprolegnia diclina VS20 adenosylhomocysteinase mRNA blastn 15857 202 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
6050039 6050039 PRJNA975724_S_NODE_6745_length_490_cov_2.273381_g6564_i0 PRJNA975724 6745 490 2.273381 11.1395669 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 361 6.99e-95   NTclustered gi|2308292368|gb|OK574295.1| 29920 g6564 i0 81.292 38.3816326530612 449 80 91 4 3 449 9902 10348 Phytophthora cactorum voucher CH9812411 mitochondrion, complete genome blastn 18807 361 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
6050263 6050263 PRJNA975724_S_NODE_75645_length_254_cov_4.629834_g75464_i0 PRJNA975724 75645 254 4.629834 11.75977836 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 104 6.28e-18   NTclustered gi|166043101|emb|CU357747.1| 100861 g75464 i0 81.89 1.0511811023622 127 20 50 2 125 251 922 799 Aphanomyces euteiches cDNA blastn 267 104 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7324946 7324946 PRJNA975724_S_NODE_75086_length_255_cov_2.115385_g74905_i0 PRJNA975724 75086 255 2.115385 5.39423175 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 108 4.87e-19   NTclustered gi|325195177|emb|FR825972.1| 890382 g74905 i0 80.69 37.1882352941176 145 23 55 5 97 237 302 445 Albugo laibachii Nc14, genomic contig CONTIG_3045_NC14_v4_482_22195 blastn 9483 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
7325266 7325266 PRJNA975724_S_NODE_87146_length_244_cov_1.350877_g86965_i0 PRJNA975724 87146 244 1.350877 3.29613988 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 198 2.67e-46   NTclustered gi|301111827|ref|XM_002904947.1| 403677 g86965 i0 82.379 25.1803278688525 227 40 93 0 16 242 537 763 Phytophthora infestans T30-4 isocitrate lyase (PITG_07027), mRNA blastn 6144 198 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
7325445 7325445 PRJNA975724_S_NODE_93786_length_228_cov_2.387097_g93605_i0 PRJNA975724 93786 228 2.387097 5.44258116 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 143 1.17e-29   NTclustered gi|937408816|ref|NC_027966.1| 114742 g93605 i0 82.036 49.6447368421053 167 30 73 0 37 203 35546 35712 Pythium insidiosum mitochondrial DNA, complete genome blastn 11319 143 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
7644866 7644866 PRJNA975724_S_NODE_46_length_2162_cov_21.900431_g41_i0 PRJNA975724 46 2162 21.900431 473.48731822 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 211 3.49e-49   NTclustered gi|937408816|ref|NC_027966.1| 114742 g41 i0 79.739 15.2428307123034 306 51 14 10 324 623 9797 10097 Pythium insidiosum mitochondrial DNA, complete genome blastn 32955 213 0.990610328638498 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
8919606 8919606 PRJNA975724_S_NODE_11987_length_433_cov_15.858333_g11806_i0 PRJNA975724 11987 433 15.858333 68.66658189 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 143 2.41e-29   NTclustered gi|698822380|ref|XM_009845917.1| 112090 g11806 i0 78.378 28.8013856812933 222 46 51 2 208 428 422 202 Aphanomyces astaci hypothetical protein mRNA blastn 12471 143 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
8919705 8919705 PRJNA975724_S_NODE_77787_length_251_cov_4.455056_g77606_i0 PRJNA975724 77787 251 4.455056 11.18219056 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 132 2.84e-26   NTclustered gi|2795022847|ref|XM_067930005.1| 4785 g77606 i0 81.176 3.27490039840637 170 26 68 1 80 249 1304 1141 Phytophthora cinnamomi Histone-binding protein RBBP4 (IUM83_05845), partial mRNA blastn 822 132 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
9873982 9873982 PRJNA975724_S_NODE_28228_length_354_cov_1.644128_g28047_i0 PRJNA975724 28228 354 1.644128 5.82021312 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|2795057611|ref|XM_067940868.1| 4785 g28047 i0 100 0.0790960451977401 28 0 8 0 88 115 458 485 Phytophthora cinnamomi Zinc ion binding protein (IUM83_16014), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
12426291 12426291 PRJNA975724_S_NODE_7730_length_475_cov_17.582090_g7549_i0 PRJNA975724 7730 475 17.58209 83.5149275 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 62.1 7.68e-5   NTclustered gi|675189506|ref|XM_008905390.1| 761204 g7549 i0 97.222 0.0757894736842105 36 1 8 0 440 475 414 379 Phytophthora parasitica INRA-310 histone partial mRNA blastn 36 62.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
14020603 14020603 PRJNA975724_S_NODE_11851_length_434_cov_22.141274_g11670_i0 PRJNA975724 11851 434 22.141274 96.09312916 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 143 2.42e-29   NTclustered gi|813164367|ref|XM_012347854.1| 695850 g11670 i0 77.459 1.56912442396313 244 51 56 4 129 370 331 90 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L37-A mRNA blastn 681 143 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14973655 14973655 PRJNA975724_S_NODE_26372_length_360_cov_6.905923_g26191_i0 PRJNA975724 26372 360 6.905923 24.8613228 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 62.1 5.67e-5   NTclustered gi|813184929|ref|XM_012351247.1| 695850 g26191 i0 93.023 0.25 43 2 12 1 188 230 1974 1933 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 90 62.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14974705 14974705 PRJNA975724_S_NODE_66652_length_268_cov_1.184615_g66471_i0 PRJNA975724 66652 268 1.184615 3.1747682 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 204 6.4e-48   NTclustered gi|813141452|ref|XM_012343573.1| 695850 g66471 i0 82.895 17.3768656716418 228 37 85 2 42 268 767 541 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L8 mRNA blastn 4657 204 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
16248358 16248358 PRJNA975724_S_NODE_16213_length_405_cov_32.319277_g16032_i0 PRJNA975724 16213 405 32.319277 130.89307185 Halophytophthora thermoambigua 2874305 SAR_Eukaryotes SAR_Eukaryotes 193 2.19e-44   NTclustered gi|2213903340|gb|OK091352.1| 2874305 g16032 i0 78.808 72.5086419753086 302 52 74 10 107 405 416 124 Halophytophthora sp. MHJ-2021h isolate BD630 from Portugal heat shock protein 90 (hsp90) gene, partial cds blastn 29366 193 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Halophytophthora Halophytophthora thermoambigua
17525575 17525575 PRJNA975724_S_NODE_92774_length_234_cov_3.236025_g92593_i0 PRJNA975724 92774 234 3.236025 7.5722985 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 169 1.99e-37   NTclustered gi|542687346|ref|NC_022178.1| 1202772 g92593 i0 84 17.8034188034188 175 28 75 0 1 175 18823 18997 Achlya hypogyna mitochondrion, complete genome blastn 4166 169 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
21347487 21347487 PRJNA975724_S_NODE_13337_length_423_cov_8.654286_g13156_i0 PRJNA975724 13337 423 8.654286 36.60762978 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 161 6.49e-35   NTclustered gi|698822200|ref|XM_009845827.1| 112090 g13156 i0 81.095 24.0756501182033 201 38 48 0 177 377 551 351 Aphanomyces astaci peptidyl-prolyl cis-trans isomerase 1 mRNA blastn 10184 161 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;