contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2542439 | 2542439 | PRJNA975724_S_NODE_18222_length_395_cov_2.062112_g18041_i0 | PRJNA975724 | 18222 | 395 | 2.062112 | 8.1453424 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 604 | 2.309999999999999e-168 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g18041 | i0 | 95.276 | 186.643037974684 | 381 | 18 | 96 | 0 | 15 | 395 | 1249125 | 1249505 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 73724 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 3497271 | 3497271 | PRJNA975724_S_NODE_60783_length_277_cov_2.132353_g60602_i0 | PRJNA975724 | 60783 | 277 | 2.132353 | 5.90661781 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 440 | 4.6499999999999983e-119 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g60602 | i0 | 95.341 | 155.447653429603 | 279 | 9 | 100 | 3 | 1 | 277 | 654468 | 654192 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 43059 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 7323845 | 7323845 | PRJNA975724_S_NODE_31806_length_342_cov_2.003717_g31625_i0 | PRJNA975724 | 31806 | 342 | 2.003717 | 6.85271214 | Estrella lausannensis | 483423 | Bacteria | Bacteria | 302 | 2.91e-77 | NTclustered | gi|343183590|gb|JN201889.1| | 483423 | g31625 | i0 | 82.659 | 169.72514619883 | 346 | 54 | 100 | 6 | 1 | 342 | 1574 | 1231 | Estrella lausannensis 23S ribosomal RNA gene, complete sequence | blastn | 58046 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Estrella | Estrella lausannensis | |
| 12425695 | 12425695 | PRJNA975724_S_NODE_55050_length_287_cov_42.383178_g54869_i0 | PRJNA975724 | 55050 | 287 | 42.383178 | 121.63972086 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 351 | 2.34e-92 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g54869 | i0 | 90.84 | 43.0174216027875 | 262 | 24 | 91 | 0 | 1 | 262 | 173622 | 173361 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 12346 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 14974537 | 14974537 | PRJNA975724_S_NODE_6072_length_501_cov_1.619159_g5893_i0 | PRJNA975724 | 6072 | 501 | 1.619159 | 8.11198659 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 604 | 2.9999999999999985e-168 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g5893 | i0 | 89.979 | 270.916167664671 | 469 | 45 | 93 | 2 | 1 | 468 | 2363973 | 2364440 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 135729 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 16569312 | 16569312 | PRJNA975724_S_NODE_53573_length_290_cov_2.129032_g53392_i0 | PRJNA975724 | 53573 | 290 | 2.129032 | 6.1741928 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 331 | 3.0800000000000006e-86 | NTclustered | gi|5042360|gb|U68460.2|SSU68460 | 83561 | g53392 | i0 | 87.543 | 108.931034482759 | 289 | 32 | 99 | 4 | 3 | 289 | 3414 | 3700 | Simkania negevensis 16S and 23S ribosomal RNA operon, complete sequence; and putative endonuclease homodimer gene, complete cds | blastn | 31590 | 333 | 0.993993993993994 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania negevensis | |
| 17523797 | 17523797 | PRJNA975724_S_NODE_27234_length_357_cov_2.982394_g27053_i0 | PRJNA975724 | 27234 | 357 | 2.982394 | 10.64714658 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 499 | 1e-136 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g27053 | i0 | 91.899 | 178.086834733894 | 358 | 27 | 100 | 2 | 1 | 357 | 2362895 | 2363251 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 63577 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 17524284 | 17524284 | PRJNA975724_S_NODE_46154_length_305_cov_2.280172_g45973_i0 | PRJNA975724 | 46154 | 305 | 2.280172 | 6.9545246 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 322 | 1.96e-83 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g45973 | i0 | 87.544 | 66.0360655737705 | 281 | 32 | 91 | 3 | 15 | 293 | 1250339 | 1250618 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 20141 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 18797768 | 18797768 | PRJNA975724_S_NODE_33195_length_338_cov_1.520755_g33014_i0 | PRJNA975724 | 33195 | 338 | 1.520755 | 5.1401519 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 135 | 3.0800000000000004e-27 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g33014 | i0 | 76.744 | 2.45562130177515 | 301 | 35 | 86 | 24 | 26 | 315 | 112016 | 111740 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 830 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 20073121 | 20073121 | PRJNA975724_S_NODE_53916_length_290_cov_1.018433_g53735_i0 | PRJNA975724 | 53916 | 290 | 1.018433 | 2.9534557 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 329 | 1.1099999999999998e-85 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g53735 | i0 | 87.119 | 113.451724137931 | 295 | 32 | 100 | 5 | 1 | 290 | 654929 | 655222 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32901 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 21669159 | 21669159 | PRJNA975724_S_NODE_67577_length_266_cov_1.860104_g67396_i0 | PRJNA975724 | 67577 | 266 | 1.860104 | 4.94787664 | Chlamydiia | 204429 | Bacteria | Bacteria | 407 | 4.509999999999999e-109 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g67396 | i0 | 94.361 | 114.53007518797 | 266 | 14 | 100 | 1 | 1 | 266 | 2363602 | 2363866 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 30465 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 23898769 | 23898769 | PRJNA975724_S_NODE_47159_length_303_cov_1.673913_g46978_i0 | PRJNA975724 | 47159 | 303 | 1.673913 | 5.07195639 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 272 | 1.99e-68 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g46978 | i0 | 84.397 | 663.425742574257 | 282 | 38 | 92 | 6 | 20 | 297 | 2364438 | 2364159 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 201018 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;