RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA975724 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3496517 3496517 PRJNA975724_S_NODE_31003_length_345_cov_1.132353_g30822_i0 PRJNA975724 31003 345 1.132353 3.90661785 Ailoscolex lacteospumosus 1046305 Annelida Annelida 60.2 1.95e-4   NTclustered gi|2920003484|emb|OZ238865.1| 1046305 g30822 i0 97.143 1.41449275362319 35 1 10 0 296 330 27773905 27773871 Ailoscolex lacteospumosus genome assembly, chromosome: 6 blastn 488 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
3496595 3496595 PRJNA975724_S_NODE_34163_length_335_cov_1.938931_g33982_i0 PRJNA975724 34163 335 1.938931 6.49541885 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.032   NTclustered gi|2920003323|emb|OZ238861.1| 1046305 g33982 i0 100 0.0835820895522388 28 0 8 0 88 115 6411909 6411936 Ailoscolex lacteospumosus genome assembly, chromosome: 2 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
20072605 20072605 PRJNA975724_S_NODE_34316_length_334_cov_11.919540_g34135_i0 PRJNA975724 34316 334 11.91954 39.8112636 Arenicola marina 6344 Annelida Annelida 200 1.06e-46   NTclustered gi|158187717|gb|EU124943.1| 6344 g34135 i0 81.967 80.9580838323353 244 37 72 7 64 304 107 346 Arenicola marina ribosomal protein rps18 mRNA, partial cds blastn 27040 200 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;