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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 18 ✖

bioproject 1

  • PRJNA975724 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
945694 945694 PRJNA975724_S_NODE_23981_length_369_cov_3.898649_g23800_i0 PRJNA975724 23981 369 3.898649 14.38601481 Auxenochlorella protothecoides 3075 Plants Plants 82.4 4.47e-11   NTclustered gi|760444820|ref|XM_011401177.1| 3075 g23800 i0 92.857 0.151761517615176 56 4 15 0 1 56 2200 2255 Auxenochlorella protothecoides DEAD-box ATP-dependent RNA helicase 7 partial mRNA blastn 56 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
946683 946683 PRJNA975724_S_NODE_6141_length_499_cov_16.927230_g5962_i0 PRJNA975724 6141 499 16.92723 84.4668777 Volvox carteri 3067 Plants Plants 139 3.64e-28   NTclustered gi|302853854|ref|XM_002958394.1| 3068 g5962 i0 82.39 8.51703406813627 159 28 32 0 312 470 392 234 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_77934), mRNA blastn 4250 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
4774003 4774003 PRJNA975724_S_NODE_23424_length_371_cov_6.365772_g23243_i0 PRJNA975724 23424 371 6.365772 23.61701412 Microthamnion kuetzingianum 34148 Plants Plants 206 2.5599999999999994e-48   NTclustered gi|2724824378|gb|PP746558.1| 34148 g23243 i0 79.73 4.29919137466307 296 50 78 9 2 292 1705 1995 Microthamnion kuetzingianum culture UTEX:318 mitochondrion, complete genome blastn 1595 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Microthamniales Microthamniaceae Microthamnion Microthamnion kuetzingianum
7644817 7644817 PRJNA975724_S_NODE_2086_length_655_cov_5.163230_g1918_i0 PRJNA975724 2086 655 5.16323 33.8191565 Chaetophoropsis 2505929 Plants Plants 87.9 1.79e-12   NTclustered gi|1834977237|ref|NC_047431.1| 2079440 g1918 i0 88.312 2.42290076335878 77 4 11 5 68 142 101129 101056 Chaetophoropsis polyrhiza chloroplast, complete genome blastn 1587 87.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetophorales Chaetophoraceae Chaetophoropsis Chaetophoropsis polyrhiza
9874834 9874834 PRJNA975724_S_NODE_61328_length_276_cov_2.275862_g61147_i0 PRJNA975724 61328 276 2.275862 6.28137912 Auxenochlorella protothecoides 3075 Plants Plants 139 1.8899999999999999e-28   NTclustered gi|760439090|ref|XM_011398312.1| 3075 g61147 i0 82.317 0.847826086956522 164 25 59 4 24 185 193 354 Auxenochlorella protothecoides 60S ribosomal protein L32-1 partial mRNA blastn 234 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
9875091 9875091 PRJNA975724_S_NODE_7128_length_483_cov_40.948780_g6947_i0 PRJNA975724 7128 483 40.94878 197.7826074 Chlamydomonas reinhardtii 3055 Plants Plants 285 4.26e-72   NTclustered gi|2082247947|ref|XM_001698013.2| 3055 g6947 i0 79.343 6.93167701863354 426 72 87 14 66 483 942 525 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA blastn 3348 285 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11470690 11470690 PRJNA975724_S_NODE_78629_length_251_cov_0.865169_g78448_i0 PRJNA975724 78629 251 0.865169 2.17157419 Eukaryota 2759 Plants Plants 119 2.21e-22   NTclustered gi|760444576|ref|XM_011401055.1| 3075 g78448 i0 97.143 4.04780876494024 70 2 28 0 152 221 385 316 Auxenochlorella protothecoides Ubiquitin-60S ribosomal protein L40-2 partial mRNA blastn 1016 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
12745985 12745985 PRJNA975724_S_NODE_21110_length_381_cov_3.730519_g20929_i0 PRJNA975724 21110 381 3.730519 14.21327739 Eukaryota 2759 Plants Plants 171 9.61e-38   NTclustered gi|1381389463|ref|NC_037449.1| 1973153 g20929 i0 78.388 66.2965879265092 273 51 71 7 29 297 20163 20431 Prototheca zopfii strain SAG 2063 mitochondrion, complete genome blastn 25259 172 0.994186046511628 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca ciferrii
13699604 13699604 PRJNA975724_S_NODE_3391_length_573_cov_25.442000_g3215_i0 PRJNA975724 3391 573 25.442 145.78266 Chlamydomonas reinhardtii 3055 Plants Plants 202 5.3099999999999985e-47   NTclustered gi|2082267188|ref|XM_043070972.1| 3055 g3215 i0 79.333 7.06108202443281 300 53 52 8 277 573 432 139 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g660150v5), mRNA blastn 4046 202 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13700187 13700187 PRJNA975724_S_NODE_55711_length_286_cov_2.112676_g55530_i0 PRJNA975724 55711 286 2.112676 6.04225336 Chlamydomonas reinhardtii 3055 Plants Plants 119 2.57e-22   NTclustered gi|2082258180|ref|XM_043067316.1| 3055 g55530 i0 84.746 48.5944055944056 118 18 41 0 146 263 333 216 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467567v5), mRNA blastn 13898 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16569245 16569245 PRJNA975724_S_NODE_10653_length_444_cov_47.870620_g10472_i0 PRJNA975724 10653 444 47.87062 212.5455528 Eukaryota 2759 Plants Plants 265 5.07e-66   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g10472 i0 81.538 66.9504504504504 325 57 73 3 118 441 460 138 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 29726 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20072111 20072111 PRJNA975724_S_NODE_14716_length_414_cov_29.346041_g14535_i0 PRJNA975724 14716 414 29.346041 121.49260974 Volvox carteri 3067 Plants Plants 230 1.7099999999999998e-55   NTclustered gi|302832853|ref|XM_002947945.1| 3068 g14535 i0 80 12.7294685990338 320 57 77 7 62 378 466 151 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_79846), mRNA blastn 5270 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
20393102 20393102 PRJNA975724_S_NODE_40536_length_318_cov_2.457143_g40355_i0 PRJNA975724 40536 318 2.457143 7.81371474 root 1 Root_unresolved Root_unresolved 52.8 0.03   NTclustered gi|37778330|gb|AY186602.1| 3055 g40355 i0 100 2.0251572327044 28 0 9 0 94 121 2793 2766 Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds blastn 644 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22624401 22624401 PRJNA975724_S_NODE_85578_length_245_cov_1.790698_g85397_i0 PRJNA975724 85578 245 1.790698 4.3872101 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.002   NTclustered gi|2082244824|ref|XM_043061855.1| 3055 g85397 i0 100 0.122448979591837 30 0 12 0 74 103 1676 1647 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g219350v5), mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23898537 23898537 PRJNA975724_S_NODE_38459_length_323_cov_4.360000_g38278_i0 PRJNA975724 38459 323 4.36 14.0828 Chlamydomonas reinhardtii 3055 Plants Plants 169 2.89e-37   NTclustered gi|2082248402|ref|XM_001695422.2| 3055 g38278 i0 84.659 42.266253869969 176 19 53 5 148 319 1017 846 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g284900v5), mRNA blastn 13652 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23899670 23899670 PRJNA975724_S_NODE_80459_length_249_cov_1.750000_g80278_i0 PRJNA975724 80459 249 1.75 4.3575 Auxenochlorella protothecoides 3075 Plants Plants 158 4.639999999999999e-34   NTclustered gi|760443472|ref|XM_011400503.1| 3075 g80278 i0 80.275 10.3654618473896 218 35 85 6 39 249 4276 4060 Auxenochlorella protothecoides Pyrophosphate-energized vacuolar membrane proton pump 1 partial mRNA blastn 2581 158 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
25172480 25172480 PRJNA975724_S_NODE_50860_length_295_cov_4.945946_g50679_i0 PRJNA975724 50860 295 4.945946 14.5905407 Chlamydomonas reinhardtii 3055 Plants Plants 65.8 3.52e-6   NTclustered gi|2082257701|ref|XM_043067119.1| 3055 g50679 i0 93.182 2.75254237288136 44 3 15 0 252 295 1179 1136 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g459050v5), mRNA blastn 812 65.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
25493267 25493267 PRJNA975724_S_NODE_17500_length_398_cov_26.181538_g17319_i0 PRJNA975724 17500 398 26.181538 104.20252124 Eukaryota 2759 Plants Plants 730 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g17319 i0 99.749 99.6909547738694 398 1 100 0 1 398 485 882 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 39677 730 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;