contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA975724" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 946171 | 946171 | PRJNA975724_S_NODE_42121_length_315_cov_0.954545_g41940_i0 | PRJNA975724 | 42121 | 315 | 0.954545 | 3.00681675 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 505 | 1.8799999999999995e-138 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g41940 | i0 | 95.847 | 129.793650793651 | 313 | 12 | 99 | 1 | 1 | 312 | 4467217 | 4466905 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 40885 | 505 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 946280 | 946280 | PRJNA975724_S_NODE_46161_length_305_cov_2.224138_g45980_i0 | PRJNA975724 | 46161 | 305 | 2.224138 | 6.7836209 | Phycisphaera mikurensis | 547188 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|381385343|dbj|AP012338.1| | 1142394 | g45980 | i0 | 92.5 | 0.222950819672131 | 40 | 2 | 13 | 1 | 26 | 65 | 3653611 | 3653573 | Phycisphaera mikurensis NBRC 102666 DNA, complete genome | blastn | 68 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera mikurensis | |
| 2542439 | 2542439 | PRJNA975724_S_NODE_18222_length_395_cov_2.062112_g18041_i0 | PRJNA975724 | 18222 | 395 | 2.062112 | 8.1453424 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 604 | 2.309999999999999e-168 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g18041 | i0 | 95.276 | 186.643037974684 | 381 | 18 | 96 | 0 | 15 | 395 | 1249125 | 1249505 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 73724 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 3497271 | 3497271 | PRJNA975724_S_NODE_60783_length_277_cov_2.132353_g60602_i0 | PRJNA975724 | 60783 | 277 | 2.132353 | 5.90661781 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 440 | 4.6499999999999983e-119 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g60602 | i0 | 95.341 | 155.447653429603 | 279 | 9 | 100 | 3 | 1 | 277 | 654468 | 654192 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 43059 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 5095128 | 5095128 | PRJNA975724_S_NODE_5064_length_521_cov_2.537946_g4885_i0 | PRJNA975724 | 5064 | 521 | 2.537946 | 13.22269866 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g4885 | i0 | 91.111 | 118.268714011516 | 495 | 43 | 95 | 1 | 27 | 520 | 1728837 | 1728343 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 61618 | 669 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6049860 | 6049860 | PRJNA975724_S_NODE_60145_length_278_cov_2.629268_g59964_i0 | PRJNA975724 | 60145 | 278 | 2.629268 | 7.30936504 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 316 | 8.22e-82 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g59964 | i0 | 87.544 | 69.9820143884892 | 281 | 25 | 99 | 9 | 3 | 278 | 4469489 | 4469214 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 19455 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 7323845 | 7323845 | PRJNA975724_S_NODE_31806_length_342_cov_2.003717_g31625_i0 | PRJNA975724 | 31806 | 342 | 2.003717 | 6.85271214 | Estrella lausannensis | 483423 | Bacteria | Bacteria | 302 | 2.91e-77 | NTclustered | gi|343183590|gb|JN201889.1| | 483423 | g31625 | i0 | 82.659 | 169.72514619883 | 346 | 54 | 100 | 6 | 1 | 342 | 1574 | 1231 | Estrella lausannensis 23S ribosomal RNA gene, complete sequence | blastn | 58046 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Estrella | Estrella lausannensis | |
| 9874489 | 9874489 | PRJNA975724_S_NODE_47828_length_302_cov_1.008734_g47647_i0 | PRJNA975724 | 47828 | 302 | 1.008734 | 3.04637668 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 73.1 | 2.16e-8 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g47647 | i0 | 92.157 | 0.311258278145695 | 51 | 4 | 17 | 0 | 15 | 65 | 1994866 | 1994916 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 94 | 73.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 11149945 | 11149945 | PRJNA975724_S_NODE_4909_length_525_cov_1.703540_g4730_i0 | PRJNA975724 | 4909 | 525 | 1.70354 | 8.943585 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 582 | 1.4799999999999999e-161 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g4730 | i0 | 86.932 | 78.8190476190476 | 528 | 58 | 99 | 10 | 3 | 525 | 1867784 | 1867263 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 41380 | 582 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 11470596 | 11470596 | PRJNA975724_S_NODE_12029_length_433_cov_4.822222_g11848_i0 | PRJNA975724 | 12029 | 433 | 4.822222 | 20.88022126 | Planctopirus | 1649480 | Bacteria | Bacteria | 544 | 5.66e-150 | NTclustered | gi|470485078|ref|NR_076683.1| | 120 | g11848 | i0 | 89.401 | 94.4965357967668 | 434 | 43 | 99 | 2 | 1 | 432 | 1616 | 1184 | Planctomyces limnophilus strain Mue 290 23S ribosomal RNA gene, complete sequence | blastn | 40917 | 544 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctopirus | Planctopirus limnophila | |
| 12425695 | 12425695 | PRJNA975724_S_NODE_55050_length_287_cov_42.383178_g54869_i0 | PRJNA975724 | 55050 | 287 | 42.383178 | 121.63972086 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 351 | 2.34e-92 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g54869 | i0 | 90.84 | 43.0174216027875 | 262 | 24 | 91 | 0 | 1 | 262 | 173622 | 173361 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 12346 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 14974537 | 14974537 | PRJNA975724_S_NODE_6072_length_501_cov_1.619159_g5893_i0 | PRJNA975724 | 6072 | 501 | 1.619159 | 8.11198659 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 604 | 2.9999999999999985e-168 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g5893 | i0 | 89.979 | 270.916167664671 | 469 | 45 | 93 | 2 | 1 | 468 | 2363973 | 2364440 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 135729 | 604 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 16569312 | 16569312 | PRJNA975724_S_NODE_53573_length_290_cov_2.129032_g53392_i0 | PRJNA975724 | 53573 | 290 | 2.129032 | 6.1741928 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 331 | 3.0800000000000006e-86 | NTclustered | gi|5042360|gb|U68460.2|SSU68460 | 83561 | g53392 | i0 | 87.543 | 108.931034482759 | 289 | 32 | 99 | 4 | 3 | 289 | 3414 | 3700 | Simkania negevensis 16S and 23S ribosomal RNA operon, complete sequence; and putative endonuclease homodimer gene, complete cds | blastn | 31590 | 333 | 0.993993993993994 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania negevensis | |
| 17523567 | 17523567 | PRJNA975724_S_NODE_18594_length_393_cov_2.037500_g18413_i0 | PRJNA975724 | 18594 | 393 | 2.0375 | 8.007375 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 464 | 4.07e-126 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g18413 | i0 | 89.067 | 251.089058524173 | 375 | 40 | 95 | 1 | 15 | 389 | 2191019 | 2190646 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 98678 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 17523797 | 17523797 | PRJNA975724_S_NODE_27234_length_357_cov_2.982394_g27053_i0 | PRJNA975724 | 27234 | 357 | 2.982394 | 10.64714658 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 499 | 1e-136 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g27053 | i0 | 91.899 | 178.086834733894 | 358 | 27 | 100 | 2 | 1 | 357 | 2362895 | 2363251 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 63577 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 17524284 | 17524284 | PRJNA975724_S_NODE_46154_length_305_cov_2.280172_g45973_i0 | PRJNA975724 | 46154 | 305 | 2.280172 | 6.9545246 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 322 | 1.96e-83 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g45973 | i0 | 87.544 | 66.0360655737705 | 281 | 32 | 91 | 3 | 15 | 293 | 1250339 | 1250618 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 20141 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 18797208 | 18797208 | PRJNA975724_S_NODE_1095_length_782_cov_8.662906_g950_i0 | PRJNA975724 | 1095 | 782 | 8.662906 | 67.74392492 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 1018 | 0 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g950 | i0 | 90.114 | 120.695652173913 | 789 | 70 | 100 | 7 | 1 | 782 | 4469230 | 4468443 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 94384 | 1018 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 18797768 | 18797768 | PRJNA975724_S_NODE_33195_length_338_cov_1.520755_g33014_i0 | PRJNA975724 | 33195 | 338 | 1.520755 | 5.1401519 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 135 | 3.0800000000000004e-27 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g33014 | i0 | 76.744 | 2.45562130177515 | 301 | 35 | 86 | 24 | 26 | 315 | 112016 | 111740 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 830 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 20073121 | 20073121 | PRJNA975724_S_NODE_53916_length_290_cov_1.018433_g53735_i0 | PRJNA975724 | 53916 | 290 | 1.018433 | 2.9534557 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 329 | 1.1099999999999998e-85 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g53735 | i0 | 87.119 | 113.451724137931 | 295 | 32 | 100 | 5 | 1 | 290 | 654929 | 655222 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32901 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 21349086 | 21349086 | PRJNA975724_S_NODE_73797_length_257_cov_1.673913_g73616_i0 | PRJNA975724 | 73797 | 257 | 1.673913 | 4.30195641 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 296 | 9.78e-76 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g73616 | i0 | 87.938 | 72.3035019455253 | 257 | 23 | 97 | 7 | 8 | 257 | 7051926 | 7051671 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 18582 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 21349190 | 21349190 | PRJNA975724_S_NODE_77_length_1765_cov_69.332151_g69_i0 | PRJNA975724 | 77 | 1765 | 69.332151 | 1223.71246515 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 2403 | 0 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g69 | i0 | 91.487 | 181.873654390935 | 1762 | 128 | 99 | 17 | 3 | 1756 | 1728992 | 1727245 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 321007 | 2403 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21669159 | 21669159 | PRJNA975724_S_NODE_67577_length_266_cov_1.860104_g67396_i0 | PRJNA975724 | 67577 | 266 | 1.860104 | 4.94787664 | Chlamydiia | 204429 | Bacteria | Bacteria | 407 | 4.509999999999999e-109 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g67396 | i0 | 94.361 | 114.53007518797 | 266 | 14 | 100 | 1 | 1 | 266 | 2363602 | 2363866 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 30465 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 22622663 | 22622663 | PRJNA975724_S_NODE_18_length_2943_cov_7.134146_g17_i0 | PRJNA975724 | 18 | 2943 | 7.134146 | 209.95791678 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 1290 | 0 | NTclustered | gi|2874253948|emb|OY970273.1| | 100233 | g17 | i0 | 76.214 | 180.427454977914 | 2678 | 500 | 93 | 115 | 3 | 2631 | 2620694 | 2623283 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09495.bin.c.1 genome assembly, chromosome: 1 | blastn | 530998 | 1290 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 23898769 | 23898769 | PRJNA975724_S_NODE_47159_length_303_cov_1.673913_g46978_i0 | PRJNA975724 | 47159 | 303 | 1.673913 | 5.07195639 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 272 | 1.99e-68 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g46978 | i0 | 84.397 | 663.425742574257 | 282 | 38 | 92 | 6 | 20 | 297 | 2364438 | 2364159 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 201018 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;