RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA971676" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3495283 3495283 PRJNA971676_P_NODE_17923_length_247_cov_0.885057_g17834_i0 PRJNA971676 17923 247 0.885057 2.18609079 Thermoplasmata archaeon 1906666 Archaea Archaea 102 2.19e-17   NTclustered gi|2108068318|gb|CP070751.1| 1906666 g17834 i0 96.721 0.246963562753036 61 2 25 0 182 242 1777341 1777281 MAG: Thermoplasmata archaeon isolate bin33 chromosome blastn 61 102 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
23897031 23897031 PRJNA971676_P_NODE_14359_length_251_cov_0.865169_g14270_i0 PRJNA971676 14359 251 0.865169 2.17157419 Thermoplasmatales archaeon 2268204 Archaea Archaea 171 6.02e-38   NTclustered gi|2107943733|gb|CP070798.1| 2268204 g14270 i0 79.675 0.9800796812749 246 43 96 5 10 251 1881454 1881212 MAG: Thermoplasmatales archaeon isolate bin14 chromosome blastn 246 171 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;