RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA971593" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21346200 21346200 PRJNA971593_P_NODE_13917_length_323_cov_0.924000_g13768_i0 PRJNA971593 13917 323 0.924 2.98452 Sycon ciliatum 27933 Porifera other_Eukaryota 62.1 5.04e-5   NTclustered gi|2732920726|ref|XM_065327200.1| 27933 g13768 i0 93.023 2.0030959752322 43 1 13 2 135 176 2294 2335 PREDICTED: Sycon ciliatum uncharacterized LOC135814133 (LOC135814133), transcript variant X2, mRNA blastn 647 62.1 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
22621397 22621397 PRJNA971593_P_NODE_23758_length_249_cov_0.875000_g23609_i0 PRJNA971593 23758 249 0.875 2.17875 Halisarca dujardinii 2583056 Porifera other_Eukaryota 52.8 0.023   NTclustered gi|2562160171|gb|OQ877042.1| 2583056 g23609 i0 100 0.112449799196787 28 0 11 0 118 145 7761 7734 Halisarca dujardinii CRB mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Halisarcidae Halisarca Halisarca dujardinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;