RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA971593" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15294162 15294162 PRJNA971593_P_NODE_12832_length_337_cov_0.973485_g12683_i0 PRJNA971593 12832 337 0.973485 3.28064445 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 237 8.18e-58   NTclustered gi|294897197|ref|XM_002775826.1| 423536 g12683 i0 81.107 63.8071216617211 307 48 90 8 2 303 330 29 Perkinsus marinus ATCC 50983 60S ribosomal protein L27a, putative, mRNA blastn 21503 239 0.99163179916318 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
18795935 18795935 PRJNA971593_P_NODE_1335_length_992_cov_13.387378_g1230_i0 PRJNA971593 1335 992 13.387378 132.80278976 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 115 1.26e-20   NTclustered gi|294891730|ref|XM_002773664.1| 423536 g1230 i0 86.667 0.44758064516129 105 13 11 1 63 167 43 146 Perkinsus marinus ATCC 50983 40S ribosomal protein S25, putative, mRNA blastn 444 115 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;