contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA971593" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6047293 | 6047293 | PRJNA971593_P_NODE_11685_length_353_cov_1.689286_g11536_i0 | PRJNA971593 | 11685 | 353 | 1.689286 | 5.96317958 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 183 | 1.1299999999999998e-41 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g11536 | i0 | 80.579 | 1.6628895184136 | 242 | 44 | 68 | 3 | 1 | 240 | 10981567 | 10981807 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 587 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 6370421 | 6370421 | PRJNA971593_P_NODE_6445_length_480_cov_1.132678_g6297_i0 | PRJNA971593 | 6445 | 480 | 1.132678 | 5.4368544 | Corallococcus | 83461 | Bacteria | Bacteria | 62.1 | 7.77e-5 | NTclustered | gi|380727201|gb|CP003389.1| | 1144275 | g6297 | i0 | 86.441 | 0.847916666666667 | 59 | 5 | 12 | 1 | 118 | 176 | 2680242 | 2680297 | Corallococcus coralloides DSM 2259, complete genome | blastn | 407 | 62.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 11147852 | 11147852 | PRJNA971593_P_NODE_22049_length_251_cov_0.865169_g21900_i0 | PRJNA971593 | 22049 | 251 | 0.865169 | 2.17157419 | Archangium violaceum | 83451 | Bacteria | Bacteria | 396 | 9.119999999999996e-106 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g21900 | i0 | 95.2 | 14.207171314741 | 250 | 12 | 99 | 0 | 2 | 251 | 107802 | 107553 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 3566 | 396 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 14972222 | 14972222 | PRJNA971593_P_NODE_23592_length_249_cov_0.875000_g23443_i0 | PRJNA971593 | 23592 | 249 | 0.875 | 2.17875 | Archangium gephyra | 48 | Bacteria | Bacteria | 444 | 3.18e-120 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g23443 | i0 | 98.8 | 54.3935742971888 | 250 | 2 | 100 | 1 | 1 | 249 | 5626645 | 5626396 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 13544 | 444 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 17522465 | 17522465 | PRJNA971593_P_NODE_6134_length_491_cov_1.289474_g5986_i0 | PRJNA971593 | 6134 | 491 | 1.289474 | 6.33131734 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 302 | 4.3100000000000004e-77 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g5986 | i0 | 78.443 | 42.6782077393075 | 501 | 81 | 99 | 23 | 3 | 491 | 2787023 | 2786538 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 20955 | 302 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 18795945 | 18795945 | PRJNA971593_P_NODE_13815_length_324_cov_1.107570_g13666_i0 | PRJNA971593 | 13815 | 324 | 1.10757 | 3.5885268 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g13666 | i0 | 92.105 | 0.234567901234568 | 38 | 2 | 11 | 1 | 239 | 275 | 11312599 | 11312636 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 76 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 21668506 | 21668506 | PRJNA971593_P_NODE_10457_length_374_cov_1.697674_g10308_i0 | PRJNA971593 | 10457 | 374 | 1.697674 | 6.34930076 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 52.8 | 0.036 | NTclustered | gi|196170270|gb|CP001131.1| | 447217 | g10308 | i0 | 100 | 0.149732620320856 | 28 | 0 | 7 | 0 | 183 | 210 | 8639 | 8666 | Anaeromyxobacter sp. K, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. K | ||
| 25170371 | 25170371 | PRJNA971593_P_NODE_19860_length_266_cov_1.637306_g19711_i0 | PRJNA971593 | 19860 | 266 | 1.637306 | 4.35523396 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2108253172|gb|CP070689.1| | 2026735 | g19711 | i0 | 96.97 | 0.12406015037594 | 33 | 1 | 12 | 0 | 84 | 116 | 1793159 | 1793127 | MAG: Deltaproteobacteria bacterium isolate bin63 chromosome | blastn | 33 | 56.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;