contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA971593" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 944407 | 944407 | PRJNA971593_P_NODE_5721_length_508_cov_1.960920_g5573_i0 | PRJNA971593 | 5721 | 508 | 1.96092 | 9.9614736 | Dellaglioa kimchii | 3344667 | Bacteria | Bacteria | 52.8 | 0.05 | NTclustered | gi|2870265686|gb|CP170736.1| | 3344667 | g5573 | i0 | 100 | 0.0551181102362205 | 28 | 0 | 6 | 0 | 112 | 139 | 1095885 | 1095912 | Dellaglioa sp. P0083 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Dellaglioa | Dellaglioa kimchii | ||
| 2219542 | 2219542 | PRJNA971593_P_NODE_1942_length_843_cov_1.342857_g1818_i0 | PRJNA971593 | 1942 | 843 | 1.342857 | 11.32028451 | Pontibacillus sp. HMF3514 | 2692425 | Bacteria | Bacteria | 56.5 | 0.007 | NTclustered | gi|1796203761|gb|CP047393.1| | 2692425 | g1818 | i0 | 96.97 | 0.0391459074733096 | 33 | 1 | 4 | 0 | 256 | 288 | 818054 | 818022 | Pontibacillus sp. HMF3514 chromosome, complete genome | blastn | 33 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Pontibacillus | Pontibacillus sp. HMF3514 | ||
| 3818225 | 3818225 | PRJNA971593_P_NODE_18663_length_276_cov_1.236453_g18514_i0 | PRJNA971593 | 18663 | 276 | 1.236453 | 3.41261028 | Niallia | 2837506 | Bacteria | Bacteria | 494 | 3.51e-135 | NTclustered | gi|1848538850|gb|CP053989.1| | 1397 | g18514 | i0 | 98.913 | 1079.8731884058 | 276 | 3 | 100 | 0 | 1 | 276 | 119885 | 120160 | Niallia circulans strain FDAARGOS_783 chromosome, complete genome | blastn | 298045 | 494 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Niallia | Niallia circulans | ||
| 7322322 | 7322322 | PRJNA971593_P_NODE_23426_length_249_cov_1.312500_g23277_i0 | PRJNA971593 | 23426 | 249 | 1.3125 | 3.268125 | Erysipelothrix sp. P66 | 3141531 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2724004414|gb|CP152290.1| | 3141531 | g23277 | i0 | 100 | 0.112449799196787 | 28 | 0 | 11 | 0 | 124 | 151 | 1518444 | 1518471 | Erysipelothrix sp. P66 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelothrix | Erysipelothrix sp. P66 | ||
| 7644240 | 7644240 | PRJNA971593_P_NODE_13706_length_325_cov_1.444444_g13557_i0 | PRJNA971593 | 13706 | 325 | 1.444444 | 4.694443 | Bacilli | 91061 | Bacteria | Bacteria | 551 | 2.469999999999999e-152 | NTclustered | gi|453201778|gb|JQ999686.1| | 165192 | g13557 | i0 | 97.231 | 390.692307692308 | 325 | 9 | 100 | 0 | 1 | 325 | 142 | 466 | Uncultured Pediococcus sp. clone GKJWQY101AMK4B 23S ribosomal RNA gene, partial sequence | blastn | 126975 | 551 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | uncultured Pediococcus sp. | ||
| 9872549 | 9872549 | PRJNA971593_P_NODE_29068_length_241_cov_0.916667_g28919_i0 | PRJNA971593 | 29068 | 241 | 0.916667 | 2.20916747 | Mammaliicoccus stepanovicii | 643214 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1231729876|emb|LT906462.1| | 643214 | g28919 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 208 | 235 | 942975 | 942948 | Staphylococcus stepanovicii strain NCTC13839 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Mammaliicoccus | Mammaliicoccus stepanovicii | ||
| 11470119 | 11470119 | PRJNA971593_P_NODE_25329_length_247_cov_0.885057_g25180_i0 | PRJNA971593 | 25329 | 247 | 0.885057 | 2.18609079 | Paenibacillus | 44249 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1043654043|gb|CP014167.1| | 1462996 | g25180 | i0 | 100 | 2 | 247 | 0 | 100 | 0 | 1 | 247 | 2693356 | 2693110 | Paenibacillus yonginensis strain DCY84 chromosome, complete genome | blastn | 494 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus yonginensis | ||
| 12423457 | 12423457 | PRJNA971593_P_NODE_22810_length_250_cov_0.870056_g22661_i0 | PRJNA971593 | 22810 | 250 | 0.870056 | 2.17514 | Streptococcus sp. FDAARGOS_192 | 1839799 | Bacteria | Bacteria | 385 | 1.97e-102 | NTclustered | gi|1352481858|gb|CP020431.2| | 1839799 | g22661 | i0 | 94.4 | 146.768 | 250 | 14 | 100 | 0 | 1 | 250 | 510156 | 509907 | Streptococcus sp. FDAARGOS_192 chromosome, complete genome | blastn | 36692 | 385 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. FDAARGOS_192 | ||
| 12745436 | 12745436 | PRJNA971593_P_NODE_13190_length_332_cov_1.073359_g13041_i0 | PRJNA971593 | 13190 | 332 | 1.073359 | 3.56355188 | FCB group | 1783270 | Bacteria | Bacteria | 69.4 | 3.11e-7 | NTclustered | gi|1016266797|gb|CP014806.1| | 241244 | g13041 | i0 | 89.091 | 1.90060240963855 | 55 | 6 | 17 | 0 | 243 | 297 | 880259 | 880313 | Rummeliibacillus stabekisii strain PP9, complete genome | blastn | 631 | 69.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Rummeliibacillus | Rummeliibacillus stabekisii | ||
| 13698135 | 13698135 | PRJNA971593_P_NODE_8851_length_408_cov_1.901493_g8702_i0 | PRJNA971593 | 8851 | 408 | 1.901493 | 7.75809144 | Sporolactobacillus sp. Y61 | 3160863 | Bacteria | Bacteria | 571 | 2.4299999999999995e-158 | NTclustered | gi|2754059576|gb|CP159510.1| | 3160863 | g8702 | i0 | 91.951 | 932.411764705882 | 410 | 30 | 100 | 3 | 1 | 408 | 282444 | 282852 | Sporolactobacillus sp. Y61 chromosome, complete genome | blastn | 380424 | 571 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Sporolactobacillaceae | Sporolactobacillus | Sporolactobacillus sp. Y61 | ||
| 16247005 | 16247005 | PRJNA971593_P_NODE_16433_length_294_cov_1.393665_g16284_i0 | PRJNA971593 | 16433 | 294 | 1.393665 | 4.0973751 | Candidatus Faecalibacterium intestinigallinarum | 2838581 | Bacteria | Bacteria | 172 | 2.0099999999999999e-38 | NTclustered | gi|2729058703|emb|OZ007003.1| | 2838581 | g16284 | i0 | 80.717 | 74.3027210884354 | 223 | 41 | 76 | 2 | 46 | 267 | 215739 | 215960 | MAG: Candidatus Faecalibacterium intestinigallinarum isolate 6755_HET_CTRL_s271.ctg000340c_hifiasm_circ MAG genome assembly, chromosome: 1 | blastn | 21845 | 172 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Candidatus Faecalibacterium intestinigallinarum | ||
| 17522257 | 17522257 | PRJNA971593_P_NODE_17814_length_282_cov_2.133971_g17665_i0 | PRJNA971593 | 17814 | 282 | 2.133971 | 6.01779822 | Jeotgalicoccus sp. WY2 | 2708346 | Bacteria | Bacteria | 521 | 1.6499999999999996e-143 | NTclustered | gi|2043521547|gb|CP049818.1| | 2708346 | g17665 | i0 | 100 | 659.549645390071 | 282 | 0 | 100 | 0 | 1 | 282 | 735389 | 735670 | Jeotgalicoccus sp. WY2 chromosome, complete genome | blastn | 185993 | 521 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Jeotgalicoccus | Jeotgalicoccus sp. WY2 | ||
| 17843764 | 17843764 | PRJNA971593_P_NODE_2594_length_739_cov_1.987988_g2458_i0 | PRJNA971593 | 2594 | 739 | 1.987988 | 14.69123132 | Staphylococcus | 1279 | Bacteria | Bacteria | 1360 | 0 | NTclustered | gi|2313042772|gb|CP094724.1| | 1290 | g2458 | i0 | 99.865 | 476.545331529093 | 739 | 1 | 100 | 0 | 1 | 739 | 724826 | 725564 | Staphylococcus hominis strain IVB6247 chromosome, complete genome | blastn | 352167 | 1360 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 20392529 | 20392529 | PRJNA971593_P_NODE_19536_length_269_cov_1.178571_g19387_i0 | PRJNA971593 | 19536 | 269 | 1.178571 | 3.17035599 | Bacillaceae | 186817 | Bacteria | Bacteria | 492 | 1.23e-134 | NTclustered | gi|1220359032|gb|KY283965.1| | 1409 | g19387 | i0 | 99.628 | 208 | 269 | 1 | 100 | 0 | 1 | 269 | 283 | 15 | Bacillus sp. (in: Bacteria) strain TR1 16S ribosomal RNA gene, partial sequence | blastn | 55952 | 492 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. (in: firmicutes) | ||
| 20392581 | 20392581 | PRJNA971593_P_NODE_29696_length_210_cov_2.262774_g29547_i0 | PRJNA971593 | 29696 | 210 | 2.262774 | 4.7518254 | Bacillus | 1386 | Bacteria | Bacteria | 215 | 2.22e-51 | NTclustered | gi|2216359396|gb|CP064266.1| | 64104 | g29547 | i0 | 93.243 | 791.852380952381 | 148 | 6 | 70 | 3 | 1 | 147 | 1608619 | 1608475 | Bacillus pseudomycoides strain N451-2 chromosome, complete genome | blastn | 166289 | 215 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus pseudomycoides | ||
| 20392620 | 20392620 | PRJNA971593_P_NODE_9396_length_396_cov_1.297214_g9247_i0 | PRJNA971593 | 9396 | 396 | 1.297214 | 5.13696744 | Streptococcus | 1301 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|1654254190|emb|LR594049.1| | 1302 | g9247 | i0 | 99.747 | 330.063131313131 | 396 | 1 | 100 | 0 | 1 | 396 | 641231 | 640836 | Streptococcus gordonii strain NCTC10231 genome assembly, chromosome: 1 | blastn | 130705 | 732 | 0.991803278688525 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii | ||
| 25492765 | 25492765 | PRJNA971593_P_NODE_23340_length_249_cov_2.346591_g23191_i0 | PRJNA971593 | 23340 | 249 | 2.346591 | 5.84301159 | Anoxybacillus | 150247 | Bacteria | Bacteria | 444 | 3.18e-120 | NTclustered | gi|906363419|gb|CP012152.1| | 198467 | g23191 | i0 | 98.795 | 809.682730923695 | 249 | 3 | 100 | 0 | 1 | 249 | 11870 | 12118 | Anoxybacillus gonensis strain G2, complete genome | blastn | 201611 | 444 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Anoxybacillus | Anoxybacillus gonensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;