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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA971593" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 15 ✖

bioproject 1

  • PRJNA971593 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
944330 944330 PRJNA971593_P_NODE_26781_length_244_cov_1.350877_g26632_i0 PRJNA971593 26781 244 1.350877 3.29613988 Dictyostelium discoideum 44689 Evosea other_Eukaryota 176 1.25e-39   NTclustered gi|66826022|ref|XM_641274.1| 352472 g26632 i0 82.673 6.67622950819672 202 31 82 3 7 206 1 200 Dictyostelium discoideum AX4 S60 ribosomal protein L36a (rpl36a) mRNA, complete cds blastn 1629 176 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
944408 944408 PRJNA971593_P_NODE_5741_length_507_cov_2.260369_g5593_i0 PRJNA971593 5741 507 2.260369 11.46007083 Ripella sp. 805 1217113 Discosea other_Eukaryota 797 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5593 i0 95.266 101.258382642998 507 16 100 7 1 507 1044 546 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 51338 797 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
2219753 2219753 PRJNA971593_P_NODE_6122_length_491_cov_1.988038_g5974_i0 PRJNA971593 6122 491 1.988038 9.76126658 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 2.0300000000000002e-65   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g5974 i0 81.105 22.8533604887984 344 51 69 10 154 490 592 256 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 11221 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6047286 6047286 PRJNA971593_P_NODE_11085_length_363_cov_1.272414_g10936_i0 PRJNA971593 11085 363 1.272414 4.61886282 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 195 5.41e-45   NTclustered gi|470382655|ref|XM_004333851.1| 1257118 g10936 i0 78.662 8.79614325068871 314 52 85 14 2 309 736 432 Acanthamoeba castellanii str. Neff serine-tRNA ligase domain containing protein (ACA1_274400), partial mRNA blastn 3193 195 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7322363 7322363 PRJNA971593_P_NODE_26066_length_245_cov_1.790698_g25917_i0 PRJNA971593 26066 245 1.790698 4.3872101 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 180 9.72e-41   NTclustered gi|470381496|ref|XM_004333736.1| 1257118 g25917 i0 80.591 79.5102040816327 237 43 96 3 1 235 734 499 Acanthamoeba castellanii str. Neff methylmalonatesemialdehyde dehydrogenase (acylating), putative (ACA1_362550), partial mRNA blastn 19480 180 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8919016 8919016 PRJNA971593_P_NODE_11547_length_356_cov_0.929329_g11398_i0 PRJNA971593 11547 356 0.929329 3.30841124 Vannellidae 95227 Discosea other_Eukaryota 364 3.809999999999998e-96   NTclustered gi|399764216|gb|JQ271727.1| 1215631 g11398 i0 88.779 85.5365168539326 303 27 85 6 56 356 270 567 Vannella sp. BEN3V 18S ribosomal RNA gene, partial sequence blastn 30451 364 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. BEN3V
9872652 9872652 PRJNA971593_P_NODE_9268_length_399_cov_0.788344_g9119_i0 PRJNA971593 9268 399 0.788344 3.14549256 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.038   NTclustered gi|470393215|ref|XM_004334806.1| 1257118 g9119 i0 100 0.0701754385964912 28 0 7 0 233 260 369 342 Acanthamoeba castellanii str. Neff splicing factor, CC1like subfamily protein (ACA1_093880), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10194989 10194989 PRJNA971593_P_NODE_5288_length_528_cov_2.887912_g5141_i0 PRJNA971593 5288 528 2.887912 15.24817536 Vannellidae 95227 Discosea other_Eukaryota 802 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g5141 i0 94.162 101.255681818182 531 23 100 7 1 528 562 37 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 53463 804 0.997512437810945 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
11147767 11147767 PRJNA971593_P_NODE_14429_length_316_cov_2.534979_g14280_i0 PRJNA971593 14429 316 2.534979 8.01053364 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 302 2.66e-77   NTclustered gi|470371714|ref|XM_004332823.1| 1257118 g14280 i0 89.496 35.2658227848101 238 25 75 0 79 316 1262 1025 Acanthamoeba castellanii str. Neff nucleolar protein Nop56, putative (ACA1_180800), partial mRNA blastn 11144 302 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12745422 12745422 PRJNA971593_P_NODE_11310_length_359_cov_1.615385_g11161_i0 PRJNA971593 11310 359 1.615385 5.79923215 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 316 1.09e-81   NTclustered gi|330792727|ref|XM_003284391.1| 5786 g11161 i0 83.929 90.891364902507 336 49 93 5 17 350 71 403 Dictyostelium purpureum elongation factor 1 alpha (DICPUDRAFT_52946), mRNA blastn 32630 316 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16247263 16247263 PRJNA971593_P_NODE_6453_length_479_cov_2.172414_g6305_i0 PRJNA971593 6453 479 2.172414 10.40586306 Acytostelium subglobosum 361139 Evosea other_Eukaryota 374 8.76e-99   NTclustered gi|831792529|ref|XM_012904619.1| 1410327 g6305 i0 81.898 68.4885177453027 453 73 94 7 1 450 565 1011 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 32806 374 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17522523 17522523 PRJNA971593_P_NODE_994_length_1123_cov_14.630476_g902_i0 PRJNA971593 994 1123 14.630476 164.30024548 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 702 0   NTclustered gi|470437282|ref|XM_004338924.1| 1257118 g902 i0 81.105 78.6447016918967 905 147 79 20 76 965 43 938 Acanthamoeba castellanii str. Neff adenine nucleotide translocator, putative (ACA1_128450), partial mRNA blastn 88318 702 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21346328 21346328 PRJNA971593_P_NODE_21817_length_251_cov_2.073034_g21668_i0 PRJNA971593 21817 251 2.073034 5.20331534 Heterostelium album 2086695 Evosea other_Eukaryota 122 1.7099999999999998e-23   NTclustered gi|1160571044|ref|XM_020575016.1| 670386 g21668 i0 81.046 1.12749003984064 153 29 61 0 3 155 283 435 Polysphondylium pallidum PN500 40S ribosomal protein S14 (rps14), partial mRNA blastn 283 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
25170243 25170243 PRJNA971593_P_NODE_100_length_2565_cov_3.880417_g60_i0 PRJNA971593 100 2565 3.880417 99.53269605 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 1646 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g60 i0 78.614 93.1052631578947 2539 505 98 32 28 2547 1 2520 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 238815 1646 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25170512 25170512 PRJNA971593_P_NODE_29460_length_240_cov_2.137725_g29311_i0 PRJNA971593 29460 240 2.137725 5.13054 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 4.35e-49   NTclustered gi|470416357|ref|XM_004336829.1| 1257118 g29311 i0 84.434 86.2875 212 31 88 2 4 214 1073 863 Acanthamoeba castellanii str. Neff fumarate hydratase, class II, putative (ACA1_130590), partial mRNA blastn 20709 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;