RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA966993" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2217640 2217640 PRJNA966993_P_NODE_60142_length_284_cov_3.203791_g59690_i0 PRJNA966993 60142 284 3.203791 9.09876644 Linderina pennispora 61395 Fungi Fungi 163 1.16e-35   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g59690 i0 82.353 6.92957746478873 187 33 66 0 93 279 403 217 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 1968 163 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
3493130 3493130 PRJNA966993_P_NODE_73923_length_264_cov_1.612565_g73471_i0 PRJNA966993 73923 264 1.612565 4.2571716 Linderina pennispora 61395 Fungi Fungi 289 1.69e-73   NTclustered gi|2028327270|ref|XM_040888737.1| 61395 g73471 i0 89.316 90.8484848484848 234 20 88 4 1 233 419 648 Linderina pennispora 40S ribosomal protein S2 (DL89DRAFT_270502), mRNA blastn 23984 289 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
13696034 13696034 PRJNA966993_P_NODE_66171_length_276_cov_1.137931_g65719_i0 PRJNA966993 66171 276 1.137931 3.14068956 Linderina pennispora 61395 Fungi Fungi 62.1 4.22e-5   NTclustered gi|2028323460|ref|XM_040890500.1| 61395 g65719 i0 88.235 0.934782608695652 51 6 18 0 35 85 1452 1402 Linderina pennispora mitochondrial carrier (DL89DRAFT_294311), partial mRNA blastn 258 62.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;